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Items: 9

1.

A neural classification method for supporting the creation of BioVerbNet.

Chiu B, Majewska O, Pyysalo S, Wey L, Stenius U, Korhonen A, Palmer M.

J Biomed Semantics. 2019 Jan 18;10(1):2. doi: 10.1186/s13326-018-0193-x.

2.

Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles.

Cohen KB, Lanfranchi A, Choi MJ, Bada M, Baumgartner WA Jr, Panteleyeva N, Verspoor K, Palmer M, Hunter LE.

BMC Bioinformatics. 2017 Aug 17;18(1):372. doi: 10.1186/s12859-017-1775-9.

3.

Temporal Annotation in the Clinical Domain.

Styler WF 4th, Bethard S, Finan S, Palmer M, Pradhan S, de Groen PC, Erickson B, Miller T, Lin C, Savova G, Pustejovsky J.

Trans Assoc Comput Linguist. 2014 Apr;2:143-154.

4.

Normalization and standardization of electronic health records for high-throughput phenotyping: the SHARPn consortium.

Pathak J, Bailey KR, Beebe CE, Bethard S, Carrell DC, Chen PJ, Dligach D, Endle CM, Hart LA, Haug PJ, Huff SM, Kaggal VC, Li D, Liu H, Marchant K, Masanz J, Miller T, Oniki TA, Palmer M, Peterson KJ, Rea S, Savova GK, Stancl CR, Sohn S, Solbrig HR, Suesse DB, Tao C, Taylor DP, Westberg L, Wu S, Zhuo N, Chute CG.

J Am Med Inform Assoc. 2013 Dec;20(e2):e341-8. doi: 10.1136/amiajnl-2013-001939. Epub 2013 Nov 4.

5.

Towards comprehensive syntactic and semantic annotations of the clinical narrative.

Albright D, Lanfranchi A, Fredriksen A, Styler WF 4th, Warner C, Hwang JD, Choi JD, Dligach D, Nielsen RD, Martin J, Ward W, Palmer M, Savova GK.

J Am Med Inform Assoc. 2013 Sep-Oct;20(5):922-30. doi: 10.1136/amiajnl-2012-001317. Epub 2013 Jan 25.

6.

A corpus of full-text journal articles is a robust evaluation tool for revealing differences in performance of biomedical natural language processing tools.

Verspoor K, Cohen KB, Lanfranchi A, Warner C, Johnson HL, Roeder C, Choi JD, Funk C, Malenkiy Y, Eckert M, Xue N, Baumgartner WA Jr, Bada M, Palmer M, Hunter LE.

BMC Bioinformatics. 2012 Aug 17;13:207. doi: 10.1186/1471-2105-13-207.

7.

The MiPACQ clinical question answering system.

Cairns BL, Nielsen RD, Masanz JJ, Martin JH, Palmer MS, Ward WH, Savova GK.

AMIA Annu Symp Proc. 2011;2011:171-80. Epub 2011 Oct 22.

8.

Towards temporal relation discovery from the clinical narrative.

Savova G, Bethard S, Styler W, Martin J, Palmer M, Masanz J, Ward W.

AMIA Annu Symp Proc. 2009 Nov 14;2009:568-72.

9.

Nominalization and alternations in biomedical language.

Cohen KB, Palmer M, Hunter L.

PLoS One. 2008 Sep 9;3(9):e3158. doi: 10.1371/journal.pone.0003158.

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