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Items: 1 to 20 of 145

1.

EvoChromo: towards a synthesis of chromatin biology and evolution.

Drinnenberg IA, Berger F, Elsässer SJ, Andersen PR, Ausió J, Bickmore WA, Blackwell AR, Erwin DH, Gahan JM, Gaut BS, Harvey ZH, Henikoff S, Kao JY, Kurdistani SK, Lemos B, Levine MT, Luger K, Malik HS, Martín-Durán JM, Peichel CL, Renfree MB, Rutowicz K, Sarkies P, Schmitz RJ, Technau U, Thornton JW, Warnecke T, Wolfe KH.

Development. 2019 Sep 26;146(19). pii: dev178962. doi: 10.1242/dev.178962.

PMID:
31558570
2.

Kinetics of DNA-protein association and dissociation by stopped-flow spectroscopy.

Rudolph J, Luger K.

Methods Enzymol. 2019;625:135-156. doi: 10.1016/bs.mie.2019.04.025. Epub 2019 May 17.

PMID:
31455524
3.

Quantitating repair protein accumulation at DNA lesions: Past, present, and future.

Mahadevan J, Bowerman S, Luger K.

DNA Repair (Amst). 2019 Sep;81:102650. doi: 10.1016/j.dnarep.2019.102650. Epub 2019 Jul 8. Review.

PMID:
31315816
4.

Q-FADD: A Mechanistic Approach for Modeling the Accumulation of Proteins at Sites of DNA Damage.

Mahadevan J, Rudolph J, Jha A, Tay JW, Dragavon J, Grumstrup EM, Luger K.

Biophys J. 2019 Jun 4;116(11):2224-2233. doi: 10.1016/j.bpj.2019.04.032. Epub 2019 May 3.

PMID:
31109734
5.

Nucleosome structure and dynamics are coming of age.

Zhou K, Gaullier G, Luger K.

Nat Struct Mol Biol. 2019 Jan;26(1):3-13. doi: 10.1038/s41594-018-0166-x. Epub 2018 Dec 10. Review.

PMID:
30532059
6.

The histone chaperone FACT modulates nucleosome structure by tethering its components.

Wang T, Liu Y, Edwards G, Krzizike D, Scherman H, Luger K.

Life Sci Alliance. 2018 Jul 10;1(4):e201800107. doi: 10.26508/lsa.201800107. eCollection 2018 Aug.

7.

Single and double box HMGB proteins differentially destabilize nucleosomes.

McCauley MJ, Huo R, Becker N, Holte MN, Muthurajan UM, Rouzina I, Luger K, Maher LJ 3rd, Israeloff NE, Williams MC.

Nucleic Acids Res. 2019 Jan 25;47(2):666-678. doi: 10.1093/nar/gky1119.

8.

Mechanistic insights into histone deposition and nucleosome assembly by the chromatin assembly factor-1.

Sauer PV, Gu Y, Liu WH, Mattiroli F, Panne D, Luger K, Churchill ME.

Nucleic Acids Res. 2018 Nov 2;46(19):9907-9917. doi: 10.1093/nar/gky823. Review.

9.

Poly(ADP-ribose) polymerase 1 searches DNA via a 'monkey bar' mechanism.

Rudolph J, Mahadevan J, Dyer P, Luger K.

Elife. 2018 Aug 8;7. pii: e37818. doi: 10.7554/eLife.37818.

10.

Archaeal DNA on the histone merry-go-round.

Bhattacharyya S, Mattiroli F, Luger K.

FEBS J. 2018 Sep;285(17):3168-3174. doi: 10.1111/febs.14495. Epub 2018 Jun 15. Review.

11.

FRET-based Stoichiometry Measurements of Protein Complexes in vitro.

Mattiroli F, Gu Y, Luger K.

Bio Protoc. 2018 Feb 5;7(3). pii: e2713. doi: 10.21769/bioprotoc.2713.

12.

Investigating the Dynamics of Destabilized Nucleosomes Using Methyl-TROSY NMR.

Kitevski-LeBlanc JL, Yuwen T, Dyer PN, Rudolph J, Luger K, Kay LE.

J Am Chem Soc. 2018 Apr 11;140(14):4774-4777. doi: 10.1021/jacs.8b00931. Epub 2018 Mar 28.

PMID:
29589929
13.

Measuring Nucleosome Assembly Activity in vitro with the Nucleosome Assembly and Quantification (NAQ) Assay.

Mattiroli F, Gu Y, Luger K.

Bio Protoc. 2018 Feb 5;8(3). pii: e2714. doi: 10.21769/BioProtoc.2714.

14.

Constitutive centromere-associated network contacts confer differential stability on CENP-A nucleosomes in vitro and in the cell.

Cao S, Zhou K, Zhang Z, Luger K, Straight AF.

Mol Biol Cell. 2018 Mar 15;29(6):751-762. doi: 10.1091/mbc.E17-10-0596. Epub 2018 Jan 17.

15.

The elongation factor Spn1 is a multi-functional chromatin binding protein.

Li S, Almeida AR, Radebaugh CA, Zhang L, Chen X, Huang L, Thurston AK, Kalashnikova AA, Hansen JC, Luger K, Stargell LA.

Nucleic Acids Res. 2018 Mar 16;46(5):2321-2334. doi: 10.1093/nar/gkx1305.

16.

Decoding the centromeric nucleosome through CENP-N.

Pentakota S, Zhou K, Smith C, Maffini S, Petrovic A, Morgan GP, Weir JR, Vetter IR, Musacchio A, Luger K.

Elife. 2017 Dec 27;6. pii: e33442. doi: 10.7554/eLife.33442.

17.

Replication Stress Shapes a Protective Chromatin Environment across Fragile Genomic Regions.

Kim J, Sturgill D, Sebastian R, Khurana S, Tran AD, Edwards GB, Kruswick A, Burkett S, Hosogane EK, Hannon WW, Weyemi U, Bonner WM, Luger K, Oberdoerffer P.

Mol Cell. 2018 Jan 4;69(1):36-47.e7. doi: 10.1016/j.molcel.2017.11.021. Epub 2017 Dec 14.

18.

Yeast CAF-1 assembles histone (H3-H4) 2 tetramers prior to DNA deposition.

Winkler DD, Zhou H, Dar MA, Zhang Z, Luger K.

Nucleic Acids Res. 2017 Sep 19;45(16):9811-9812. doi: 10.1093/nar/gkx657. No abstract available.

19.

Structure of histone-based chromatin in Archaea.

Mattiroli F, Bhattacharyya S, Dyer PN, White AE, Sandman K, Burkhart BW, Byrne KR, Lee T, Ahn NG, Santangelo TJ, Reeve JN, Luger K.

Science. 2017 Aug 11;357(6351):609-612. doi: 10.1126/science.aaj1849.

20.

Biochemical and Biophysical Methods for Analysis of Poly(ADP-Ribose) Polymerase 1 and Its Interactions with Chromatin.

Chassé MH, Muthurajan UM, Clark NJ, Kramer MA, Chakravarthy S, Irving T, Luger K.

Methods Mol Biol. 2017;1608:231-253. doi: 10.1007/978-1-4939-6993-7_16.

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