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Items: 1 to 20 of 78


Functional Microbiomics in Liver Transplantation: Identifying Novel Targets for Improving Allograft Outcomes.

Kriss M, Verna EC, Rosen HR, Lozupone CA.

Transplantation. 2018 Nov 30. doi: 10.1097/TP.0000000000002568. [Epub ahead of print]


An exploration of Prevotella-rich microbiomes in HIV and men who have sex with men.

Armstrong AJS, Shaffer M, Nusbacher NM, Griesmer C, Fiorillo S, Schneider JM, Preston Neff C, Li SX, Fontenot AP, Campbell T, Palmer BE, Lozupone CA.

Microbiome. 2018 Nov 5;6(1):198. doi: 10.1186/s40168-018-0580-7.


Gut Microbiota in the First 2 Years of Life and the Association with Body Mass Index at Age 12 in a Norwegian Birth Cohort.

Stanislawski MA, Dabelea D, Wagner BD, Iszatt N, Dahl C, Sontag MK, Knight R, Lozupone CA, Eggesbø M.

MBio. 2018 Oct 23;9(5). pii: e01751-18. doi: 10.1128/mBio.01751-18.


Subversion of Systemic Glucose Metabolism as a Mechanism to Support the Growth of Leukemia Cells.

Ye H, Adane B, Khan N, Alexeev E, Nusbacher N, Minhajuddin M, Stevens BM, Winters AC, Lin X, Ashton JM, Purev E, Xing L, Pollyea DA, Lozupone CA, Serkova NJ, Colgan SP, Jordan CT.

Cancer Cell. 2018 Oct 8;34(4):659-673.e6. doi: 10.1016/j.ccell.2018.08.016. Epub 2018 Sep 27.


Low diversity gut microbiota dysbiosis: drivers, functional implications and recovery.

Kriss M, Hazleton KZ, Nusbacher NM, Martin CG, Lozupone CA.

Curr Opin Microbiol. 2018 Aug;44:34-40. doi: 10.1016/j.mib.2018.07.003. Epub 2018 Jul 20. Review.


American Gut: an Open Platform for Citizen Science Microbiome Research.

McDonald D, Hyde E, Debelius JW, Morton JT, Gonzalez A, Ackermann G, Aksenov AA, Behsaz B, Brennan C, Chen Y, DeRight Goldasich L, Dorrestein PC, Dunn RR, Fahimipour AK, Gaffney J, Gilbert JA, Gogul G, Green JL, Hugenholtz P, Humphrey G, Huttenhower C, Jackson MA, Janssen S, Jeste DV, Jiang L, Kelley ST, Knights D, Kosciolek T, Ladau J, Leach J, Marotz C, Meleshko D, Melnik AV, Metcalf JL, Mohimani H, Montassier E, Navas-Molina J, Nguyen TT, Peddada S, Pevzner P, Pollard KS, Rahnavard G, Robbins-Pianka A, Sangwan N, Shorenstein J, Smarr L, Song SJ, Spector T, Swafford AD, Thackray VG, Thompson LR, Tripathi A, Vázquez-Baeza Y, Vrbanac A, Wischmeyer P, Wolfe E, Zhu Q; American Gut Consortium , Knight R.

mSystems. 2018 May 15;3(3). pii: e00031-18. doi: 10.1128/mSystems.00031-18. eCollection 2018 May-Jun.


Fecal Microbiota Composition Drives Immune Activation in HIV-infected Individuals.

Neff CP, Krueger O, Xiong K, Arif S, Nusbacher N, Schneider JM, Cunningham AW, Armstrong A, Li S, McCarter MD, Campbell TB, Lozupone CA, Palmer BE.

EBioMedicine. 2018 Apr;30:192-202. doi: 10.1016/j.ebiom.2018.03.024. Epub 2018 Mar 26.


Unraveling Interactions between the Microbiome and the Host Immune System To Decipher Mechanisms of Disease.

Lozupone CA.

mSystems. 2018 Mar 6;3(2). pii: e00183-17. doi: 10.1128/mSystems.00183-17. eCollection 2018 Mar-Apr.


Gut microbiota in adolescents and the association with fatty liver: the EPOCH study.

Stanislawski MA, Lozupone CA, Wagner BD, Eggesbø M, Sontag MK, Nusbacher NM, Martinez M, Dabelea D.

Pediatr Res. 2018 Aug;84(2):219-227. doi: 10.1038/pr.2018.32. Epub 2018 Apr 18.


Prevalence and Source of Fecal and Oral Bacteria on Infant, Child, and Adult Hands.

Shaffer M, Lozupone C.

mSystems. 2018 Jan 16;3(1). pii: e00192-17. doi: 10.1128/mSystems.00192-17. eCollection 2018 Jan-Feb.


Differences in fecal microbial metabolites and microbiota of children with autism spectrum disorders.

Kang DW, Ilhan ZE, Isern NG, Hoyt DW, Howsmon DP, Shaffer M, Lozupone CA, Hahn J, Adams JB, Krajmalnik-Brown R.

Anaerobe. 2018 Feb;49:121-131. doi: 10.1016/j.anaerobe.2017.12.007. Epub 2017 Dec 22.


Microbial Biodiversity: Straight from the Dolphin's Mouth.

Narrowe A, Miller CS, Lozupone C.

Curr Biol. 2017 Dec 18;27(24):R1307-R1309. doi: 10.1016/j.cub.2017.10.068.


Gut microbiome of mothers delivering prematurely shows reduced diversity and lower relative abundance of Bifidobacterium and Streptococcus.

Dahl C, Stanislawski M, Iszatt N, Mandal S, Lozupone C, Clemente JC, Knight R, Stigum H, Eggesbø M.

PLoS One. 2017 Oct 25;12(10):e0184336. doi: 10.1371/journal.pone.0184336. eCollection 2017.


Perinatal Bisphenol A Exposure Induces Chronic Inflammation in Rabbit Offspring via Modulation of Gut Bacteria and Their Metabolites.

Reddivari L, Veeramachaneni DNR, Walters WA, Lozupone C, Palmer J, Hewage MKK, Bhatnagar R, Amir A, Kennett MJ, Knight R, Vanamala JKP.

mSystems. 2017 Oct 10;2(5). pii: e00093-17. doi: 10.1128/mSystems.00093-17. eCollection 2017 Sep-Oct.


Pre-pregnancy weight, gestational weight gain, and the gut microbiota of mothers and their infants.

Stanislawski MA, Dabelea D, Wagner BD, Sontag MK, Lozupone CA, Eggesbø M.

Microbiome. 2017 Sep 4;5(1):113. doi: 10.1186/s40168-017-0332-0.


Microbiome and metabolome data integration provides insight into health and disease.

Shaffer M, Armstrong AJS, Phelan VV, Reisdorph N, Lozupone CA.

Transl Res. 2017 Nov;189:51-64. doi: 10.1016/j.trsl.2017.07.001. Epub 2017 Jul 14. Review.


The environment, epigenome, and asthma.

Yang IV, Lozupone CA, Schwartz DA.

J Allergy Clin Immunol. 2017 Jul;140(1):14-23. doi: 10.1016/j.jaci.2017.05.011. Review.


Fecal Bacterial Communities in treated HIV infected individuals on two antiretroviral regimens.

Pinto-Cardoso S, Lozupone C, Briceño O, Alva-Hernández S, Téllez N, Adriana A, Murakami-Ogasawara A, Reyes-Terán G.

Sci Rep. 2017 Mar 6;7:43741. doi: 10.1038/srep43741.


Normalization and microbial differential abundance strategies depend upon data characteristics.

Weiss S, Xu ZZ, Peddada S, Amir A, Bittinger K, Gonzalez A, Lozupone C, Zaneveld JR, Vázquez-Baeza Y, Birmingham A, Hyde ER, Knight R.

Microbiome. 2017 Mar 3;5(1):27. doi: 10.1186/s40168-017-0237-y.


Striking a Balance with Help from our Little Friends - How the Gut Microbiota Contributes to Immune Homeostasis.

Arnolds KL, Lozupone CA.

Yale J Biol Med. 2016 Sep 30;89(3):389-395. eCollection 2016 Sep. Review.

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