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Items: 1 to 20 of 102


Coreference annotation and resolution in the Colorado Richly Annotated Full Text (CRAFT) corpus of biomedical journal articles.

Cohen KB, Lanfranchi A, Choi MJ, Bada M, Baumgartner WA Jr, Panteleyeva N, Verspoor K, Palmer M, Hunter LE.

BMC Bioinformatics. 2017 Aug 17;18(1):372. doi: 10.1186/s12859-017-1775-9.


Intraglomerular gap junctions enhance interglomerular synchrony in a sparsely connected olfactory bulb network.

Pouille F, McTavish TS, Hunter LE, Restrepo D, Schoppa NE.

J Physiol. 2017 Sep 1;595(17):5965-5986. doi: 10.1113/JP274408. Epub 2017 Jul 23.


Systems biology of facial development: contributions of ectoderm and mesenchyme.

Hooper JE, Feng W, Li H, Leach SM, Phang T, Siska C, Jones KL, Spritz RA, Hunter LE, Williams T.

Dev Biol. 2017 Jun 1;426(1):97-114. doi: 10.1016/j.ydbio.2017.03.025. Epub 2017 Mar 29.


Celebrating parasites.

Greene CS, Garmire LX, Gilbert JA, Ritchie MD, Hunter LE.

Nat Genet. 2017 Mar 30;49(4):483-484. doi: 10.1038/ng.3830. No abstract available.



Moore JH, Jennings SF, Greene CS, Hunter LE, Perkins AD, Williams-Devane C, Wunsch DC, Zhao Z, Huang X.

Pac Symp Biocomput. 2017;22:646-648. doi: 10.1142/9789813207813_0060.


Aging promotes acquisition of naive-like CD8+ memory T cell traits and enhanced functionalities.

Eberlein J, Davenport B, Nguyen T, Victorino F, Haist K, Jhun K, Karimpour-Fard A, Hunter L, Kedl R, Clambey ET, Homann D.

J Clin Invest. 2016 Oct 3;126(10):3942-3960. doi: 10.1172/JCI88546. Epub 2016 Sep 12.


Gene Ontology synonym generation rules lead to increased performance in biomedical concept recognition.

Funk CS, Cohen KB, Hunter LE, Verspoor KM.

J Biomed Semantics. 2016 Sep 9;7:52. doi: 10.1186/s13326-016-0096-7.


A survey of computational tools for downstream analysis of proteomic and other omic datasets.

Karimpour-Fard A, Epperson LE, Hunter LE.

Hum Genomics. 2015 Oct 28;9:28. doi: 10.1186/s40246-015-0050-2. Review.


Visual analysis of biological data-knowledge networks.

Vehlow C, Kao DP, Bristow MR, Hunter LE, Weiskopf D, Görg C.

BMC Bioinformatics. 2015 Apr 29;16:135. doi: 10.1186/s12859-015-0550-z.


KaBOB: ontology-based semantic integration of biomedical databases.

Livingston KM, Bada M, Baumgartner WA Jr, Hunter LE.

BMC Bioinformatics. 2015 Apr 23;16:126. doi: 10.1186/s12859-015-0559-3.


Training the next generation of quantitative biologists in the era of big data.

Pattin KA, Greene AC, Altman RB, Cohen KB, Wethington E, Görg C, Hunter LE, Muse SV, Radivojac P, Moore JH.

Pac Symp Biocomput. 2015:488-92.


Peax: interactive visual analysis and exploration of complex clinical phenotype and gene expression association.

Hinterberg MA, Kao DP, Bristow MR, Hunter LE, Port JD, Görg C.

Pac Symp Biocomput. 2015:419-30.


A twentieth anniversary tribute to PSB.

Hewett D, Whirl-Carrillo M, Hunter LE, Altman RB, Klein TE.

Pac Symp Biocomput. 2015:1-7.


Large-scale biomedical concept recognition: an evaluation of current automatic annotators and their parameters.

Funk C, Baumgartner W Jr, Garcia B, Roeder C, Bada M, Cohen KB, Hunter LE, Verspoor K.

BMC Bioinformatics. 2014 Feb 26;15:59. doi: 10.1186/1471-2105-15-59.


Building the next generation of quantitative biologists.

Pattin KA, Greene AC, Altman RB, Hunter LE, Ross DA, Foster JA, Moore JH.

Pac Symp Biocomput. 2014:417-21.


Combining heterogenous data for prediction of disease related and pharmacogenes.

Funk CS, Hunter LE, Cohen KB.

Pac Symp Biocomput. 2014:328-39.


Representing annotation compositionality and provenance for the Semantic Web.

Livingston KM, Bada M, Hunter LE, Verspoor K.

J Biomed Semantics. 2013 Nov 22;4:38. doi: 10.1186/2041-1480-4-38. eCollection 2013.


Teaching research ethics better: focus on excellent science, not bad scientists.

Yarborough M, Hunter L.

Clin Transl Sci. 2013 Jun;6(3):201-3. doi: 10.1111/cts.12035. Epub 2013 Apr 18.


Rocky mountain conference on bioinformatics celebrates 10 years.

Hunter LE.

PLoS Comput Biol. 2013;9(5):e1003076. doi: 10.1371/journal.pcbi.1003076. Epub 2013 May 30. No abstract available.


Chapter 16: text mining for translational bioinformatics.

Cohen KB, Hunter LE.

PLoS Comput Biol. 2013 Apr;9(4):e1003044. doi: 10.1371/journal.pcbi.1003044. Epub 2013 Apr 25.

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