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Items: 1 to 20 of 21

1.

The demographic history of African Drosophila melanogaster.

Kapopoulou A, Pfeifer SP, Jensen JD, Laurent S.

Genome Biol Evol. 2018 Aug 29. doi: 10.1093/gbe/evy185. [Epub ahead of print]

PMID:
30169784
2.

The SIB Swiss Institute of Bioinformatics' resources: focus on curated databases.

SIB Swiss Institute of Bioinformatics Members.

Nucleic Acids Res. 2016 Jan 4;44(D1):D27-37. doi: 10.1093/nar/gkv1310. Epub 2015 Nov 28.

3.

The evolution of gene expression and binding specificity of the largest transcription factor family in primates.

Kapopoulou A, Mathew L, Wong A, Trono D, Jensen JD.

Evolution. 2016 Jan;70(1):167-80. doi: 10.1111/evo.12819. Epub 2015 Dec 9.

4.

Release of human cytomegalovirus from latency by a KAP1/TRIM28 phosphorylation switch.

Rauwel B, Jang SM, Cassano M, Kapopoulou A, Barde I, Trono D.

Elife. 2015 Apr 7;4. doi: 10.7554/eLife.06068.

5.

TRIM28 represses transcription of endogenous retroviruses in neural progenitor cells.

Fasching L, Kapopoulou A, Sachdeva R, Petri R, Jönsson ME, Männe C, Turelli P, Jern P, Cammas F, Trono D, Jakobsson J.

Cell Rep. 2015 Jan 6;10(1):20-8. doi: 10.1016/j.celrep.2014.12.004. Epub 2014 Dec 24.

6.

Evolutionally dynamic L1 regulation in embryonic stem cells.

Castro-Diaz N, Ecco G, Coluccio A, Kapopoulou A, Yazdanpanah B, Friedli M, Duc J, Jang SM, Turelli P, Trono D.

Genes Dev. 2014 Jul 1;28(13):1397-409. doi: 10.1101/gad.241661.114. Epub 2014 Jun 17.

7.

Interplay of TRIM28 and DNA methylation in controlling human endogenous retroelements.

Turelli P, Castro-Diaz N, Marzetta F, Kapopoulou A, Raclot C, Duc J, Tieng V, Quenneville S, Trono D.

Genome Res. 2014 Aug;24(8):1260-70. doi: 10.1101/gr.172833.114. Epub 2014 May 30.

8.

Loss of transcriptional control over endogenous retroelements during reprogramming to pluripotency.

Friedli M, Turelli P, Kapopoulou A, Rauwel B, Castro-Díaz N, Rowe HM, Ecco G, Unzu C, Planet E, Lombardo A, Mangeat B, Wildhaber BE, Naldini L, Trono D.

Genome Res. 2014 Aug;24(8):1251-9. doi: 10.1101/gr.172809.114. Epub 2014 May 30.

9.

[A KRAB/KAP1-miRNA cascade regulates erythropoiesis through stage-specific control of mitophagy].

Barde I, Rauwel B, Marin-Florez RM, Corsinotti A, Laurenti E, Verp S, Offner S, Marquis J, Kapopoulou A, Vanicek J, Trono D.

Med Sci (Paris). 2014 Jan;30(1):12-5. doi: 10.1051/medsci/20143001003. Epub 2014 Jan 24. French. No abstract available.

10.

A KRAB/KAP1-miRNA cascade regulates erythropoiesis through stage-specific control of mitophagy.

Barde I, Rauwel B, Marin-Florez RM, Corsinotti A, Laurenti E, Verp S, Offner S, Marquis J, Kapopoulou A, Vanicek J, Trono D.

Science. 2013 Apr 19;340(6130):350-3. doi: 10.1126/science.1232398. Epub 2013 Mar 14.

11.

Global and stage specific patterns of Krüppel-associated-box zinc finger protein gene expression in murine early embryonic cells.

Corsinotti A, Kapopoulou A, Gubelmann C, Imbeault M, Santoni de Sio FR, Rowe HM, Mouscaz Y, Deplancke B, Trono D.

PLoS One. 2013;8(2):e56721. doi: 10.1371/journal.pone.0056721. Epub 2013 Feb 22.

12.

TRIM28 repression of retrotransposon-based enhancers is necessary to preserve transcriptional dynamics in embryonic stem cells.

Rowe HM, Kapopoulou A, Corsinotti A, Fasching L, Macfarlan TS, Tarabay Y, Viville S, Jakobsson J, Pfaff SL, Trono D.

Genome Res. 2013 Mar;23(3):452-61. doi: 10.1101/gr.147678.112. Epub 2012 Dec 10.

13.

The KRAB-ZFP/KAP1 system contributes to the early embryonic establishment of site-specific DNA methylation patterns maintained during development.

Quenneville S, Turelli P, Bojkowska K, Raclot C, Offner S, Kapopoulou A, Trono D.

Cell Rep. 2012 Oct 25;2(4):766-73. doi: 10.1016/j.celrep.2012.08.043. Epub 2012 Oct 4.

14.

KAP1 regulates gene networks controlling T-cell development and responsiveness.

Santoni de Sio FR, Barde I, Offner S, Kapopoulou A, Corsinotti A, Bojkowska K, Genolet R, Thomas JH, Luescher IF, Pinschewer D, Harris N, Trono D.

FASEB J. 2012 Nov;26(11):4561-75. doi: 10.1096/fj.12-206177. Epub 2012 Aug 7.

15.

Liver-specific ablation of Krüppel-associated box-associated protein 1 in mice leads to male-predominant hepatosteatosis and development of liver adenoma.

Bojkowska K, Aloisio F, Cassano M, Kapopoulou A, Santoni de Sio F, Zangger N, Offner S, Cartoni C, Thomas C, Quenneville S, Johnsson K, Trono D.

Hepatology. 2012 Oct;56(4):1279-90. doi: 10.1002/hep.25767. Epub 2012 Aug 27.

16.

KAP1 regulates gene networks controlling mouse B-lymphoid cell differentiation and function.

Santoni de Sio FR, Massacand J, Barde I, Offner S, Corsinotti A, Kapopoulou A, Bojkowska K, Dagklis A, Fernandez M, Ghia P, Thomas JH, Pinschewer D, Harris N, Trono D.

Blood. 2012 May 17;119(20):4675-85. doi: 10.1182/blood-2011-12-401117. Epub 2012 Mar 27.

17.

In embryonic stem cells, ZFP57/KAP1 recognize a methylated hexanucleotide to affect chromatin and DNA methylation of imprinting control regions.

Quenneville S, Verde G, Corsinotti A, Kapopoulou A, Jakobsson J, Offner S, Baglivo I, Pedone PV, Grimaldi G, Riccio A, Trono D.

Mol Cell. 2011 Nov 4;44(3):361-72. doi: 10.1016/j.molcel.2011.08.032.

18.

A gene-rich, transcriptionally active environment and the pre-deposition of repressive marks are predictive of susceptibility to KRAB/KAP1-mediated silencing.

Meylan S, Groner AC, Ambrosini G, Malani N, Quenneville S, Zangger N, Kapopoulou A, Kauzlaric A, Rougemont J, Ciuffi A, Bushman FD, Bucher P, Trono D.

BMC Genomics. 2011 Jul 26;12:378. doi: 10.1186/1471-2164-12-378.

19.

Probable zoonotic leprosy in the southern United States.

Truman RW, Singh P, Sharma R, Busso P, Rougemont J, Paniz-Mondolfi A, Kapopoulou A, Brisse S, Scollard DM, Gillis TP, Cole ST.

N Engl J Med. 2011 Apr 28;364(17):1626-33. doi: 10.1056/NEJMoa1010536.

20.

The MycoBrowser portal: a comprehensive and manually annotated resource for mycobacterial genomes.

Kapopoulou A, Lew JM, Cole ST.

Tuberculosis (Edinb). 2011 Jan;91(1):8-13. doi: 10.1016/j.tube.2010.09.006. Epub 2010 Oct 25.

PMID:
20980200

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