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Items: 1 to 20 of 48

1.

Dynamics of Bacterial Gene Regulatory Networks.

Shis DL, Bennett MR, Igoshin OA.

Annu Rev Biophys. 2018 May 20;47:447-467. doi: 10.1146/annurev-biophys-070317-032947. Epub 2018 Mar 23.

PMID:
29570353
2.

Mechanism of Kin-Discriminatory Demarcation Line Formation between Colonies of Swarming Bacteria.

Patra P, Vassallo CN, Wall D, Igoshin OA.

Biophys J. 2017 Dec 5;113(11):2477-2486. doi: 10.1016/j.bpj.2017.09.020.

PMID:
29212001
3.

On the mechanism of long-range orientational order of fibroblasts.

Li X, Balagam R, He TF, Lee PP, Igoshin OA, Levine H.

Proc Natl Acad Sci U S A. 2017 Aug 22;114(34):8974-8979. doi: 10.1073/pnas.1707210114. Epub 2017 Aug 7.

4.

Heterogeneity of Stop Codon Readthrough in Single Bacterial Cells and Implications for Population Fitness.

Fan Y, Evans CR, Barber KW, Banerjee K, Weiss KJ, Margolin W, Igoshin OA, Rinehart J, Ling J.

Mol Cell. 2017 Sep 7;67(5):826-836.e5. doi: 10.1016/j.molcel.2017.07.010. Epub 2017 Aug 3.

PMID:
28781237
5.

Modeling mechanical interactions in growing populations of rod-shaped bacteria.

Winkle JJ, Igoshin OA, Bennett MR, Josić K, Ott W.

Phys Biol. 2017 Jul 28;14(5):055001. doi: 10.1088/1478-3975/aa7bae.

PMID:
28649958
6.

Data-driven modeling reveals cell behaviors controlling self-organization during Myxococcus xanthus development.

Cotter CR, Schüttler HB, Igoshin OA, Shimkets LJ.

Proc Natl Acad Sci U S A. 2017 Jun 6;114(23):E4592-E4601. doi: 10.1073/pnas.1620981114. Epub 2017 May 22.

7.

Elucidating interplay of speed and accuracy in biological error correction.

Banerjee K, Kolomeisky AB, Igoshin OA.

Proc Natl Acad Sci U S A. 2017 May 16;114(20):5183-5188. doi: 10.1073/pnas.1614838114. Epub 2017 May 2.

8.

Accuracy of Substrate Selection by Enzymes Is Controlled by Kinetic Discrimination.

Banerjee K, Kolomeisky AB, Igoshin OA.

J Phys Chem Lett. 2017 Apr 6;8(7):1552-1556. doi: 10.1021/acs.jpclett.7b00441. Epub 2017 Mar 23.

PMID:
28322561
9.

Role of Autoregulation and Relative Synthesis of Operon Partners in Alternative Sigma Factor Networks.

Narula J, Tiwari A, Igoshin OA.

PLoS Comput Biol. 2016 Dec 15;12(12):e1005267. doi: 10.1371/journal.pcbi.1005267. eCollection 2016 Dec.

10.

Functional requirements of cellular differentiation: lessons from Bacillus subtilis.

Narula J, Fujita M, Igoshin OA.

Curr Opin Microbiol. 2016 Dec;34:38-46. doi: 10.1016/j.mib.2016.07.011. Epub 2016 Aug 6. Review.

PMID:
27501460
11.

Colony Expansion of Socially Motile Myxococcus xanthus Cells Is Driven by Growth, Motility, and Exopolysaccharide Production.

Patra P, Kissoon K, Cornejo I, Kaplan HB, Igoshin OA.

PLoS Comput Biol. 2016 Jun 30;12(6):e1005010. doi: 10.1371/journal.pcbi.1005010. eCollection 2016 Jun.

12.

Slowdown of growth controls cellular differentiation.

Narula J, Kuchina A, Zhang F, Fujita M, Süel GM, Igoshin OA.

Mol Syst Biol. 2016 May 23;12(5):871. doi: 10.15252/msb.20156691.

13.

FlowCal: A User-Friendly, Open Source Software Tool for Automatically Converting Flow Cytometry Data from Arbitrary to Calibrated Units.

Castillo-Hair SM, Sexton JT, Landry BP, Olson EJ, Igoshin OA, Tabor JJ.

ACS Synth Biol. 2016 Jul 15;5(7):774-80. doi: 10.1021/acssynbio.5b00284. Epub 2016 May 12.

14.

Non-monotonic Response to Monotonic Stimulus: Regulation of Glyoxylate Shunt Gene-Expression Dynamics in Mycobacterium tuberculosis.

Ascensao JA, Datta P, Hancioglu B, Sontag E, Gennaro ML, Igoshin OA.

PLoS Comput Biol. 2016 Feb 22;12(2):e1004741. doi: 10.1371/journal.pcbi.1004741. eCollection 2016 Feb.

15.

Mechanism for Collective Cell Alignment in Myxococcus xanthus Bacteria.

Balagam R, Igoshin OA.

PLoS Comput Biol. 2015 Aug 26;11(8):e1004474. doi: 10.1371/journal.pcbi.1004474. eCollection 2015 Aug.

16.

Chromosomal Arrangement of Phosphorelay Genes Couples Sporulation and DNA Replication.

Narula J, Kuchina A, Lee DD, Fujita M, Süel GM, Igoshin OA.

Cell. 2015 Jul 16;162(2):328-337. doi: 10.1016/j.cell.2015.06.012. Epub 2015 Jul 9.

17.

The Psp system of Mycobacterium tuberculosis integrates envelope stress-sensing and envelope-preserving functions.

Datta P, Ravi J, Guerrini V, Chauhan R, Neiditch MB, Shell SS, Fortune SM, Hancioglu B, Igoshin OA, Gennaro ML.

Mol Microbiol. 2015 Aug;97(3):408-22. doi: 10.1111/mmi.13037. Epub 2015 May 26.

18.

How to train your microbe: methods for dynamically characterizing gene networks.

Castillo-Hair SM, Igoshin OA, Tabor JJ.

Curr Opin Microbiol. 2015 Apr;24:113-23. doi: 10.1016/j.mib.2015.01.008. Epub 2015 Feb 10. Review.

19.

Myxococcus xanthus gliding motors are elastically coupled to the substrate as predicted by the focal adhesion model of gliding motility.

Balagam R, Litwin DB, Czerwinski F, Sun M, Kaplan HB, Shaevitz JW, Igoshin OA.

PLoS Comput Biol. 2014 May 8;10(5):e1003619. doi: 10.1371/journal.pcbi.1003619. eCollection 2014 May.

20.

Tunable protease-activatable virus nanonodes.

Judd J, Ho ML, Tiwari A, Gomez EJ, Dempsey C, Van Vliet K, Igoshin OA, Silberg JJ, Agbandje-McKenna M, Suh J.

ACS Nano. 2014 May 27;8(5):4740-6. doi: 10.1021/nn500550q. Epub 2014 May 5.

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