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Items: 1 to 20 of 71


TB Transmission: Closing the Gaps.

Comas I, Gardy JL.

EBioMedicine. 2018 Aug;34:4-5. doi: 10.1016/j.ebiom.2018.07.020. Epub 2018 Jul 30. No abstract available.


Introducing the JMBE Themed Issue on Science Communication.

Mangan DF, Cloyd ET, Romo JA, Wessner DR, Westenberg DJ, Adukwu E, Menninger H, Gardy J.

J Microbiol Biol Educ. 2018 Mar 30;19(1). pii: 19.1.9. doi: 10.1128/jmbe.v19i1.1601. eCollection 2018. No abstract available.


Genotyping and Whole-Genome Sequencing to Identify Tuberculosis Transmission to Pediatric Patients in British Columbia, Canada, 2005-2014.

Guthrie JL, Delli Pizzi A, Roth D, Kong C, Jorgensen D, Rodrigues M, Tang P, Cook VJ, Johnston J, Gardy JL.

J Infect Dis. 2018 Aug 24;218(7):1155-1163. doi: 10.1093/infdis/jiy278.


Universal Genotyping for Tuberculosis Prevention Programs: a 5-Year Comparison with On-Request Genotyping.

Guthrie JL, Kong C, Roth D, Jorgensen D, Rodrigues M, Tang P, Thejoe M, Elwood K, Cook VJ, Johnston J, Gardy JL.

J Clin Microbiol. 2018 Apr 25;56(5). pii: e01778-17. doi: 10.1128/JCM.01778-17. Print 2018 May.


Exogenous mineralization of hard tissues using photo-absorptive minerals and femto-second lasers; the case of dental enamel.

Anastasiou AD, Strafford S, Thomson CL, Gardy J, Edwards TJ, Malinowski M, Hussain SA, Metzger NK, Hassanpour A, Brown CTA, Brown AP, Duggal MS, Jha A.

Acta Biomater. 2018 Apr 15;71:86-95. doi: 10.1016/j.actbio.2018.02.012. Epub 2018 Feb 17.


Evidence-based design and evaluation of a whole genome sequencing clinical report for the reference microbiology laboratory.

Crisan A, McKee G, Munzner T, Gardy JL.

PeerJ. 2018 Jan 10;6:e4218. doi: 10.7717/peerj.4218. eCollection 2018.


MentaLiST - A fast MLST caller for large MLST schemes.

Feijao P, Yao HT, Fornika D, Gardy J, Hsiao W, Chauve C, Chindelevitch L.

Microb Genom. 2018 Jan 10. doi: 10.1099/mgen.0.000146. [Epub ahead of print]


Waste to biodiesel: A preliminary assessment for Saudi Arabia.

Rehan M, Gardy J, Demirbas A, Rashid U, Budzianowski WM, Pant D, Nizami AS.

Bioresour Technol. 2018 Feb;250:17-25. doi: 10.1016/j.biortech.2017.11.024. Epub 2017 Nov 10.


Towards a genomics-informed, real-time, global pathogen surveillance system.

Gardy JL, Loman NJ.

Nat Rev Genet. 2018 Jan;19(1):9-20. doi: 10.1038/nrg.2017.88. Epub 2017 Nov 13. Review.


Genome Sequences of the Mycobacterium tuberculosis H37Rv-ptkA Deletion Mutant and Its Parental Strain.

Tsui CKM, Wong D, Narula G, Gardy JL, Hsiao WWH, Av-Gay Y.

Genome Announc. 2017 Nov 2;5(44). pii: e01156-17. doi: 10.1128/genomeA.01156-17.


Molecular Epidemiology of Tuberculosis in British Columbia, Canada: A 10-Year Retrospective Study.

Guthrie JL, Kong C, Roth D, Jorgensen D, Rodrigues M, Hoang L, Tang P, Cook V, Johnston J, Gardy JL.

Clin Infect Dis. 2018 Mar 5;66(6):849-856. doi: 10.1093/cid/cix906.


Complete Genome Sequence of Mycobacterium chimaera SJ42, a Nonoutbreak Strain from an Immunocompromised Patient with Pulmonary Disease.

Hasan NA, Warren RL, Epperson LE, Malecha A, Alexander DC, Turenne CY, MacMillan D, Birol I, Pleasance S, Coope R, Jones SJM, Romney MG, Ng M, Chan T, Rodrigues M, Tang P, Gardy JL, Strong M.

Genome Announc. 2017 Sep 14;5(37). pii: e00963-17. doi: 10.1128/genomeA.00963-17.


Mycobacterium chimaera: unraveling a mystery through genomics.

Gardy JL.

Lancet Infect Dis. 2017 Oct;17(10):1004-1005. doi: 10.1016/S1473-3099(17)30356-0. Epub 2017 Jul 12. No abstract available.


Declaring a tuberculosis outbreak over with genomic epidemiology.

Hatherell HA, Didelot X, Pollock SL, Tang P, Crisan A, Johnston JC, Colijn C, Gardy JL.

Microb Genom. 2016 May 31;2(5):e000060. doi: 10.1099/mgen.0.000060. eCollection 2016 May.


Self-rated health and reasons for non-vaccination against seasonal influenza in Canadian adults with asthma.

Guthrie JL, Fisman D, Gardy JL.

PLoS One. 2017 Feb 16;12(2):e0172117. doi: 10.1371/journal.pone.0172117. eCollection 2017.


RNA-Seq Analysis of Gene Expression, Viral Pathogen, and B-Cell/T-Cell Receptor Signatures in Complex Chronic Disease.

Bouquet J, Gardy JL, Brown S, Pfeil J, Miller RR, Morshed M, Avina-Zubieta A, Shojania K, McCabe M, Parker S, Uyaguari M, Federman S, Tang P, Steiner T, Otterstater M, Holt R, Moore R, Chiu CY, Patrick DM; Complex Chronic Disease Study Group.

Clin Infect Dis. 2017 Feb 15;64(4):476-481. doi: 10.1093/cid/ciw767.


Genomic Infectious Disease Epidemiology in Partially Sampled and Ongoing Outbreaks.

Didelot X, Fraser C, Gardy J, Colijn C.

Mol Biol Evol. 2017 Apr 1;34(4):997-1007. doi: 10.1093/molbev/msw275.


A brief primer on genomic epidemiology: lessons learned from Mycobacterium tuberculosis.

Guthrie JL, Gardy JL.

Ann N Y Acad Sci. 2017 Jan;1388(1):59-77. doi: 10.1111/nyas.13273. Epub 2016 Dec 23. Review.


Metagenomic Investigation of Plasma in Individuals with ME/CFS Highlights the Importance of Technical Controls to Elucidate Contamination and Batch Effects.

Miller RR, Uyaguari-Diaz M, McCabe MN, Montoya V, Gardy JL, Parker S, Steiner T, Hsiao W, Nesbitt MJ, Tang P, Patrick DM; CCD Study Group.

PLoS One. 2016 Nov 2;11(11):e0165691. doi: 10.1371/journal.pone.0165691. eCollection 2016.


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