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Items: 1 to 20 of 79

1.

Phase Separation Comes of Age: From Phenomenology to Single Molecules.

Chowdhury A, Yu M, Lemke EA.

Mol Cell. 2019 May 2;74(3):413-415. doi: 10.1016/j.molcel.2019.04.016.

PMID:
31051137
2.

Associating HIV-1 envelope glycoprotein structures with states on the virus observed by smFRET.

Lu M, Ma X, Castillo-Menendez LR, Gorman J, Alsahafi N, Ermel U, Terry DS, Chambers M, Peng D, Zhang B, Zhou T, Reichard N, Wang K, Grover JR, Carman BP, Gardner MR, Nikić-Spiegel I, Sugawara A, Arthos J, Lemke EA, Smith AB 3rd, Farzan M, Abrams C, Munro JB, McDermott AB, Finzi A, Kwong PD, Blanchard SC, Sodroski JG, Mothes W.

Nature. 2019 Apr;568(7752):415-419. doi: 10.1038/s41586-019-1101-y. Epub 2019 Apr 10.

3.

Designer membraneless organelles enable codon reassignment of selected mRNAs in eukaryotes.

Reinkemeier CD, Girona GE, Lemke EA.

Science. 2019 Mar 29;363(6434). pii: eaaw2644. doi: 10.1126/science.aaw2644.

PMID:
30923194
4.

Mechanism-Dependent Modulation of Ultrafast Interfacial Water Dynamics in Intrinsically Disordered Protein Complexes.

Chowdhury A, Kovalenko SA, Aramburu IV, Tan PS, Ernsting NP, Lemke EA.

Angew Chem Int Ed Engl. 2019 Mar 26;58(14):4720-4724. doi: 10.1002/anie.201813354. Epub 2019 Feb 28.

5.

Probing Differential Binding Mechanisms of Phenylalanine-Glycine-Rich Nucleoporins by Single-Molecule FRET.

Tan PS, Lemke EA.

Methods Enzymol. 2018;611:327-346. doi: 10.1016/bs.mie.2018.08.034. Epub 2018 Sep 25.

PMID:
30471692
6.

Publisher Correction: Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.

Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Adariani SR, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T.

Nat Methods. 2018 Nov;15(11):984. doi: 10.1038/s41592-018-0193-x.

PMID:
30327572
7.

Precision and accuracy of single-molecule FRET measurements-a multi-laboratory benchmark study.

Hellenkamp B, Schmid S, Doroshenko O, Opanasyuk O, Kühnemuth R, Rezaei Adariani S, Ambrose B, Aznauryan M, Barth A, Birkedal V, Bowen ME, Chen H, Cordes T, Eilert T, Fijen C, Gebhardt C, Götz M, Gouridis G, Gratton E, Ha T, Hao P, Hanke CA, Hartmann A, Hendrix J, Hildebrandt LL, Hirschfeld V, Hohlbein J, Hua B, Hübner CG, Kallis E, Kapanidis AN, Kim JY, Krainer G, Lamb DC, Lee NK, Lemke EA, Levesque B, Levitus M, McCann JJ, Naredi-Rainer N, Nettels D, Ngo T, Qiu R, Robb NC, Röcker C, Sanabria H, Schlierf M, Schröder T, Schuler B, Seidel H, Streit L, Thurn J, Tinnefeld P, Tyagi S, Vandenberk N, Vera AM, Weninger KR, Wünsch B, Yanez-Orozco IS, Michaelis J, Seidel CAM, Craggs TD, Hugel T.

Nat Methods. 2018 Sep;15(9):669-676. doi: 10.1038/s41592-018-0085-0. Epub 2018 Aug 31. Erratum in: Nat Methods. 2018 Nov;15(11):984.

8.

Comment on "Innovative scattering analysis shows that hydrophobic disordered proteins are expanded in water".

Fuertes G, Banterle N, Ruff KM, Chowdhury A, Pappu RV, Svergun DI, Lemke EA.

Science. 2018 Aug 31;361(6405). pii: eaau8230. doi: 10.1126/science.aau8230.

PMID:
30166461
9.

Direct Visualization of the Conformational Dynamics of Single Influenza Hemagglutinin Trimers.

Das DK, Govindan R, Nikić-Spiegel I, Krammer F, Lemke EA, Munro JB.

Cell. 2018 Aug 9;174(4):926-937.e12. doi: 10.1016/j.cell.2018.05.050. Epub 2018 Jun 28.

10.

Beyond the Transport Function of Import Receptors: What's All the FUS about?

Mikhaleva S, Lemke EA.

Cell. 2018 Apr 19;173(3):549-553. doi: 10.1016/j.cell.2018.04.002. Review.

11.

Bistetrazine-Cyanines as Double-Clicking Fluorogenic Two-Point Binder or Crosslinker Probes.

Kormos A, Koehler C, Fodor EA, Rutkai ZR, Martin ME, Mező G, Lemke EA, Kele P.

Chemistry. 2018 Jun 21;24(35):8841-8847. doi: 10.1002/chem.201800910. Epub 2018 May 29.

PMID:
29676491
12.

Two Differential Binding Mechanisms of FG-Nucleoporins and Nuclear Transport Receptors.

Tan PS, Aramburu IV, Mercadante D, Tyagi S, Chowdhury A, Spitz D, Shammas SL, Gräter F, Lemke EA.

Cell Rep. 2018 Mar 27;22(13):3660-3671. doi: 10.1016/j.celrep.2018.03.022.

13.

Fluorogenic Tetrazine-Siliconrhodamine Probe for the Labeling of Noncanonical Amino Acid Tagged Proteins.

Kozma E, Paci G, Estrada Girona G, Lemke EA, Kele P.

Methods Mol Biol. 2018;1728:337-363. doi: 10.1007/978-1-4939-7574-7_22.

PMID:
29405009
14.

MultiBacTAG-Genetic Code Expansion Using the Baculovirus Expression System in Sf21 Cells.

Koehler C, Lemke EA.

Methods Mol Biol. 2018;1728:297-311. doi: 10.1007/978-1-4939-7574-7_19.

PMID:
29405006
15.

Palladium-unleashed proteins: gentle aldehyde decaging for site-selective protein modification.

Brabham RL, Spears RJ, Walton J, Tyagi S, Lemke EA, Fascione MA.

Chem Commun (Camb). 2018 Feb 11;54(12):1501-1504. doi: 10.1039/c7cc07740h. Epub 2018 Jan 24.

PMID:
29363688
16.

Architecture of TAF11/TAF13/TBP complex suggests novel regulation properties of general transcription factor TFIID.

Gupta K, Watson AA, Baptista T, Scheer E, Chambers AL, Koehler C, Zou J, Obong-Ebong I, Kandiah E, Temblador A, Round A, Forest E, Man P, Bieniossek C, Laue ED, Lemke EA, Rappsilber J, Robinson CV, Devys D, Tora L, Berger I.

Elife. 2017 Nov 7;6. pii: e30395. doi: 10.7554/eLife.30395.

17.

Monomeric Huntingtin Exon 1 Has Similar Overall Structural Features for Wild-Type and Pathological Polyglutamine Lengths.

Warner JB 4th, Ruff KM, Tan PS, Lemke EA, Pappu RV, Lashuel HA.

J Am Chem Soc. 2017 Oct 18;139(41):14456-14469. doi: 10.1021/jacs.7b06659. Epub 2017 Oct 9.

18.

Sampling Long- versus Short-Range Interactions Defines the Ability of Force Fields To Reproduce the Dynamics of Intrinsically Disordered Proteins.

Mercadante D, Wagner JA, Aramburu IV, Lemke EA, Gräter F.

J Chem Theory Comput. 2017 Sep 12;13(9):3964-3974. doi: 10.1021/acs.jctc.7b00143. Epub 2017 Aug 28.

PMID:
28805390
19.

Decoupling of size and shape fluctuations in heteropolymeric sequences reconciles discrepancies in SAXS vs. FRET measurements.

Fuertes G, Banterle N, Ruff KM, Chowdhury A, Mercadante D, Koehler C, Kachala M, Estrada Girona G, Milles S, Mishra A, Onck PR, Gräter F, Esteban-Martín S, Pappu RV, Svergun DI, Lemke EA.

Proc Natl Acad Sci U S A. 2017 Aug 1;114(31):E6342-E6351. doi: 10.1073/pnas.1704692114. Epub 2017 Jul 17.

20.

Floppy but not sloppy: Interaction mechanism of FG-nucleoporins and nuclear transport receptors.

Aramburu IV, Lemke EA.

Semin Cell Dev Biol. 2017 Aug;68:34-41. doi: 10.1016/j.semcdb.2017.06.026. Epub 2017 Jun 30. Review.

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