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Items: 1 to 20 of 86

1.

Modular epitope binding predicts influenza quasispecies dominance and vaccine effectiveness: Application to 2018/19 season.

Bonomo ME, Kim RY, Deem MW.

Vaccine. 2019 May 27;37(24):3154-3158. doi: 10.1016/j.vaccine.2019.03.068. Epub 2019 May 3.

2.

Machine-learning approach to the design of OSDAs for zeolite beta.

Daeyaert F, Ye F, Deem MW.

Proc Natl Acad Sci U S A. 2019 Feb 26;116(9):3413-3418. doi: 10.1073/pnas.1818763116. Epub 2019 Feb 7.

3.

Corrigendum: Static and Dynamic Measures of Human Brain Connectivity Predict Complementary Aspects of Human Cognitive Performance.

Ramos-Nuñez AI, Fischer-Baum S, Martin RC, Yue Q, Ye F, Deem MW.

Front Hum Neurosci. 2018 Sep 7;12:345. doi: 10.3389/fnhum.2018.00345. eCollection 2018.

4.
5.

Reply to Xu and Ye: On the Sufficiency of the Pepitope Method.

Bonomo ME, Deem MW.

Clin Infect Dis. 2019 Jan 7;68(2):347. doi: 10.1093/cid/ciy561. No abstract available.

PMID:
29986011
6.

The Standard Genetic Code Facilitates Exploration of the Space of Functional Nucleotide Sequences.

Tripathi S, Deem MW.

J Mol Evol. 2018 Jul;86(6):325-339. doi: 10.1007/s00239-018-9852-x. Epub 2018 Jun 29.

PMID:
29959476
7.

Predicting Influenza H3N2 Vaccine Efficacy From Evolution of the Dominant Epitope.

Bonomo ME, Deem MW.

Clin Infect Dis. 2018 Sep 14;67(7):1129-1131. doi: 10.1093/cid/ciy323.

PMID:
29672670
8.

Modularity of the metabolic gene network as a prognostic biomarker for hepatocellular carcinoma.

Ye F, Jia D, Lu M, Levine H, Deem MW.

Oncotarget. 2018 Feb 22;9(19):15015-15026. doi: 10.18632/oncotarget.24551. eCollection 2018 Mar 13.

9.

The physicist's guide to one of biotechnology's hottest new topics: CRISPR-Cas.

Bonomo ME, Deem MW.

Phys Biol. 2018 Apr 30;15(4):041002. doi: 10.1088/1478-3975/aab6d6. Review.

PMID:
29543191
10.

Single molecule sequencing of the M13 virus genome without amplification.

Zhao L, Deng L, Li G, Jin H, Cai J, Shang H, Li Y, Wu H, Xu W, Zeng L, Zhang R, Zhao H, Wu P, Zhou Z, Zheng J, Ezanno P, Yang AX, Yan Q, Deem MW, He J.

PLoS One. 2017 Dec 18;12(12):e0188181. doi: 10.1371/journal.pone.0188181. eCollection 2017.

11.

Static and Dynamic Measures of Human Brain Connectivity Predict Complementary Aspects of Human Cognitive Performance.

Ramos-Nuñez AI, Fischer-Baum S, Martin RC, Yue Q, Ye F, Deem MW.

Front Hum Neurosci. 2017 Aug 24;11:420. doi: 10.3389/fnhum.2017.00420. eCollection 2017. Erratum in: Front Hum Neurosci. 2018 Sep 07;12:345.

12.

Brain Modularity Mediates the Relation between Task Complexity and Performance.

Yue Q, Martin RC, Fischer-Baum S, Ramos-Nuñez AI, Ye F, Deem MW.

J Cogn Neurosci. 2017 Sep;29(9):1532-1546. doi: 10.1162/jocn_a_01142. Epub 2017 May 4.

PMID:
28471728
13.

Enantiomerically enriched, polycrystalline molecular sieves.

Brand SK, Schmidt JE, Deem MW, Daeyaert F, Ma Y, Terasaki O, Orazov M, Davis ME.

Proc Natl Acad Sci U S A. 2017 May 16;114(20):5101-5106. doi: 10.1073/pnas.1704638114. Epub 2017 May 1.

14.

Non-classical phase diagram for virus bacterial coevolution mediated by clustered regularly interspaced short palindromic repeats.

Han P, Deem MW.

J R Soc Interface. 2017 Feb;14(127). pii: 20160905. doi: 10.1098/rsif.2016.0905.

15.

A Pareto Algorithm for Efficient De Novo Design of Multi-functional Molecules.

Daeyaert F, Deem MW.

Mol Inform. 2017 Jan;36(1-2). doi: 10.1002/minf.201600044. Epub 2016 Jul 21.

PMID:
28124835
16.

T Cell Repertoire Diversity Is Decreased in Type 1 Diabetes Patients.

Tong Y, Li Z, Zhang H, Xia L, Zhang M, Xu Y, Wang Z, Deem MW, Sun X, He J.

Genomics Proteomics Bioinformatics. 2016 Dec;14(6):338-348. doi: 10.1016/j.gpb.2016.10.003. Epub 2016 Dec 24.

17.

Modular knowledge systems accelerate human migration in asymmetric random environments.

Wang D, Deem MW.

J R Soc Interface. 2016 Dec;13(125). pii: 20160778.

18.

Template-Framework Interactions in Tetraethylammonium-Directed Zeolite Synthesis.

Schmidt JE, Fu D, Deem MW, Weckhuysen BM.

Angew Chem Int Ed Engl. 2016 Dec 23;55(52):16044-16048. doi: 10.1002/anie.201609053. Epub 2016 Nov 22.

19.

Prediction of influenza B vaccine effectiveness from sequence data.

Pan Y, Deem MW.

Vaccine. 2016 Aug 31;34(38):4610-4617. doi: 10.1016/j.vaccine.2016.07.015. Epub 2016 Jul 26.

PMID:
27473305
20.

Influenza evolution and H3N2 vaccine effectiveness, with application to the 2014/2015 season.

Li X, Deem MW.

Protein Eng Des Sel. 2016 Aug;29(8):309-15. doi: 10.1093/protein/gzw017. Epub 2016 Jun 16.

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