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Items: 13

1.

The rare and undiagnosed diseases diagnostic service - application of massively parallel sequencing in a state-wide clinical service.

Baynam G, Pachter N, McKenzie F, Townshend S, Slee J, Kiraly-Borri C, Vasudevan A, Hawkins A, Broley S, Schofield L, Verhoef H, Walker CE, Molster C, Blackwell JM, Jamieson S, Tang D, Lassmann T, Mina K, Beilby J, Davis M, Laing N, Murphy L, Weeramanthri T, Dawkins H, Goldblatt J.

Orphanet J Rare Dis. 2016 Jun 11;11(1):77. doi: 10.1186/s13023-016-0462-7.

2.

Reference genotype and exome data from an Australian Aboriginal population for health-based research.

Tang D, Anderson D, Francis RW, Syn G, Jamieson SE, Lassmann T, Blackwell JM.

Sci Data. 2016 Apr 12;3:160023. doi: 10.1038/sdata.2016.23.

3.

CCL2 enhances pluripotency of human induced pluripotent stem cells by activating hypoxia related genes.

Hasegawa Y, Tang D, Takahashi N, Hayashizaki Y, Forrest AR; FANTOM Consortium., Suzuki H.

Sci Rep. 2014 Jun 24;4:5228. doi: 10.1038/srep05228. Erratum in: Sci Rep. 2014;4:6385.

4.

Suppression of artifacts and barcode bias in high-throughput transcriptome analyses utilizing template switching.

Tang DT, Plessy C, Salimullah M, Suzuki AM, Calligaris R, Gustincich S, Carninci P.

Nucleic Acids Res. 2013 Feb 1;41(3):e44. doi: 10.1093/nar/gks1128.

5.

piRNAs warrant investigation in Rett Syndrome: an omics perspective.

Saxena A, Tang D, Carninci P.

Dis Markers. 2012;33(5):261-75. doi: 10.3233/DMA-2012-0932.

6.

Site-specific DICER and DROSHA RNA products control the DNA-damage response.

Francia S, Michelini F, Saxena A, Tang D, de Hoon M, Anelli V, Mione M, Carninci P, d'Adda di Fagagna F.

Nature. 2012 Aug 9;488(7410):231-5. doi: 10.1038/nature11179.

7.

Refining transcriptional programs in kidney development by integration of deep RNA-sequencing and array-based spatial profiling.

Thiagarajan RD, Cloonan N, Gardiner BB, Mercer TR, Kolle G, Nourbakhsh E, Wani S, Tang D, Krishnan K, Georgas KM, Rumballe BA, Chiu HS, Steen JA, Mattick JS, Little MH, Grimmond SM.

BMC Genomics. 2011 Sep 5;12:441. doi: 10.1186/1471-2164-12-441.

8.

Identification of anchor genes during kidney development defines ontological relationships, molecular subcompartments and regulatory pathways.

Thiagarajan RD, Georgas KM, Rumballe BA, Lesieur E, Chiu HS, Taylor D, Tang DT, Grimmond SM, Little MH.

PLoS One. 2011 Feb 28;6(2):e17286. doi: 10.1371/journal.pone.0017286.

9.

Comparative gene expression analysis of genital tubercle development reveals a putative appendicular Wnt7 network for the epidermal differentiation.

Chiu HS, Szucsik JC, Georgas KM, Jones JL, Rumballe BA, Tang D, Grimmond SM, Lewis AG, Aronow BJ, Lessard JL, Little MH.

Dev Biol. 2010 Aug 15;344(2):1071-87. doi: 10.1016/j.ydbio.2010.05.495.

10.

RNA-MATE: a recursive mapping strategy for high-throughput RNA-sequencing data.

Cloonan N, Xu Q, Faulkner GJ, Taylor DF, Tang DT, Kolle G, Grimmond SM.

Bioinformatics. 2009 Oct 1;25(19):2615-6. doi: 10.1093/bioinformatics/btp459.

11.

Analysis of early nephron patterning reveals a role for distal RV proliferation in fusion to the ureteric tip via a cap mesenchyme-derived connecting segment.

Georgas K, Rumballe B, Valerius MT, Chiu HS, Thiagarajan RD, Lesieur E, Aronow BJ, Brunskill EW, Combes AN, Tang D, Taylor D, Grimmond SM, Potter SS, McMahon AP, Little MH.

Dev Biol. 2009 Aug 15;332(2):273-86. doi: 10.1016/j.ydbio.2009.05.578.

12.

Analysis of the complement and molecular evolution of tRNA genes in cow.

Tang DT, Glazov EA, McWilliam SM, Barris WC, Dalrymple BP.

BMC Genomics. 2009 Apr 24;10:188. doi: 10.1186/1471-2164-10-188.

13.

A genome wide survey of SNP variation reveals the genetic structure of sheep breeds.

Kijas JW, Townley D, Dalrymple BP, Heaton MP, Maddox JF, McGrath A, Wilson P, Ingersoll RG, McCulloch R, McWilliam S, Tang D, McEwan J, Cockett N, Oddy VH, Nicholas FW, Raadsma H; International Sheep Genomics Consortium..

PLoS One. 2009;4(3):e4668. doi: 10.1371/journal.pone.0004668.

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