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Items: 1 to 20 of 42

1.

Computational search for UV radiation resistance strategies in Deinococcus swuensis isolated from Paramo ecosystems.

Díaz-Riaño J, Posada L, Acosta IC, Ruíz-Pérez C, García-Castillo C, Reyes A, Zambrano MM.

PLoS One. 2019 Dec 2;14(12):e0221540. doi: 10.1371/journal.pone.0221540. eCollection 2019.

2.

Bogotá River anthropogenic contamination alters microbial communities and promotes spread of antibiotic resistance genes.

Posada-Perlaza CE, Ramírez-Rojas A, Porras P, Adu-Oppong B, Botero-Coy AM, Hernández F, Anzola JM, Díaz L, Dantas G, Reyes A, Zambrano MM.

Sci Rep. 2019 Aug 13;9(1):11764. doi: 10.1038/s41598-019-48200-6.

3.

Global phylogeography and ancient evolution of the widespread human gut virus crAssphage.

Edwards RA, Vega AA, Norman HM, Ohaeri M, Levi K, Dinsdale EA, Cinek O, Aziz RK, McNair K, Barr JJ, Bibby K, Brouns SJJ, Cazares A, de Jonge PA, Desnues C, Díaz Muñoz SL, Fineran PC, Kurilshikov A, Lavigne R, Mazankova K, McCarthy DT, Nobrega FL, Reyes Muñoz A, Tapia G, Trefault N, Tyakht AV, Vinuesa P, Wagemans J, Zhernakova A, Aarestrup FM, Ahmadov G, Alassaf A, Anton J, Asangba A, Billings EK, Cantu VA, Carlton JM, Cazares D, Cho GS, Condeff T, Cortés P, Cranfield M, Cuevas DA, De la Iglesia R, Decewicz P, Doane MP, Dominy NJ, Dziewit L, Elwasila BM, Eren AM, Franz C, Fu J, Garcia-Aljaro C, Ghedin E, Gulino KM, Haggerty JM, Head SR, Hendriksen RS, Hill C, Hyöty H, Ilina EN, Irwin MT, Jeffries TC, Jofre J, Junge RE, Kelley ST, Khan Mirzaei M, Kowalewski M, Kumaresan D, Leigh SR, Lipson D, Lisitsyna ES, Llagostera M, Maritz JM, Marr LC, McCann A, Molshanski-Mor S, Monteiro S, Moreira-Grez B, Morris M, Mugisha L, Muniesa M, Neve H, Nguyen NP, Nigro OD, Nilsson AS, O'Connell T, Odeh R, Oliver A, Piuri M, Prussin Ii AJ, Qimron U, Quan ZX, Rainetova P, Ramírez-Rojas A, Raya R, Reasor K, Rice GAO, Rossi A, Santos R, Shimashita J, Stachler EN, Stene LC, Strain R, Stumpf R, Torres PJ, Twaddle A, Ugochi Ibekwe M, Villagra N, Wandro S, White B, Whiteley A, Whiteson KL, Wijmenga C, Zambrano MM, Zschach H, Dutilh BE.

Nat Microbiol. 2019 Oct;4(10):1727-1736. doi: 10.1038/s41564-019-0494-6. Epub 2019 Jul 8.

PMID:
31285584
4.

Recovery and functional validation of hidden soil enzymes in metagenomic libraries.

Calderon D, Peña L, Suarez A, Villamil C, Ramirez-Rojas A, Anzola JM, García-Betancur JC, Cepeda ML, Uribe D, Del Portillo P, Mongui A.

Microbiologyopen. 2019 Apr;8(4):e00572. doi: 10.1002/mbo3.572. Epub 2019 Mar 9.

5.

Hypoxia Is Not a Main Stress When Mycobacterium tuberculosis Is in a Dormancy-Like Long-Chain Fatty Acid Environment.

Del Portillo P, García-Morales L, Menéndez MC, Anzola JM, Rodríguez JG, Helguera-Repetto AC, Ares MA, Prados-Rosales R, Gonzalez-Y-Merchand JA, García MJ.

Front Cell Infect Microbiol. 2019 Jan 9;8:449. doi: 10.3389/fcimb.2018.00449. eCollection 2018.

6.

Genome Sequences of Actinobacteria from Extreme Environments in Colombia.

Cantillo A, Shapiro N, Woyke T, Kyrpides NC, Baena S, Zambrano MM.

Microbiol Resour Announc. 2018 Dec 6;7(22). pii: e01384-18. doi: 10.1128/MRA.01384-18. eCollection 2018 Dec.

7.

Necrotizing fasciitis caused by Apophysomyces variabilis in an immunocompetent patient.

Rodríguez JY, Morales-López SE, Rodríguez GJ, Álvarez-Moreno CA, Ocampo W, Cepeda ML, Mora-Valderrama MA.

Med Mycol Case Rep. 2017 Dec 21;20:4-6. doi: 10.1016/j.mmcr.2017.12.002. eCollection 2018 Jun.

8.

Correction to: Microbial diversity of saline environments: searching for cytotoxic activities.

Díaz-Cárdenas C, Cantillo A, Rojas LY, Sandoval T, Fiorentino S, Robles J, Ramos FA, Zambrano MM, Baena S.

AMB Express. 2018 Mar 9;8(1):35. doi: 10.1186/s13568-018-0561-z.

9.

Microbial diversity of saline environments: searching for cytotoxic activities.

Díaz-Cárdenas C, Cantillo A, Rojas LY, Sandoval T, Fiorentino S, Robles J, Ramos FA, Zambrano MM, Baena S.

AMB Express. 2017 Dec 22;7(1):223. doi: 10.1186/s13568-017-0527-6. Erratum in: AMB Express. 2018 Mar 9;8(1):35.

10.

Bioelectrochemical Detection of Mycobacterium tuberculosis ESAT-6 in an Antibody-Based Biomicrosystem.

Sepulveda D, Aroca MA, Varela A, Del Portillo P, Osma JF.

Sensors (Basel). 2017 Sep 22;17(10). pii: E2178. doi: 10.3390/s17102178.

11.

Compartmentalized metabolic network reconstruction of microbial communities to determine the effect of agricultural intervention on soils.

Alvarez-Silva MC, Álvarez-Yela AC, Gómez-Cano F, Zambrano MM, Husserl J, Danies G, Restrepo S, González-Barrios AF.

PLoS One. 2017 Aug 2;12(8):e0181826. doi: 10.1371/journal.pone.0181826. eCollection 2017.

12.

In vitro and in silico characterization of metagenomic soil-derived cellulases capable of hydrolyzing oil palm empty fruit bunch.

Medina LMP, Ardila DC, Zambrano MM, Restrepo S, Barrios AFG.

Biotechnol Rep (Amst). 2017 Jun 10;15:55-62. doi: 10.1016/j.btre.2017.06.003. eCollection 2017 Sep.

13.

Mining lipolytic enzymes in community DNA from high Andean soils using a targeted approach.

Borda-Molina D, Montaña JS, Zambrano MM, Baena S.

Antonie Van Leeuwenhoek. 2017 Aug;110(8):1035-1051. doi: 10.1007/s10482-017-0877-8. Epub 2017 May 18.

PMID:
28523377
14.

Mycofier: a new machine learning-based classifier for fungal ITS sequences.

Delgado-Serrano L, Restrepo S, Bustos JR, Zambrano MM, Anzola JM.

BMC Res Notes. 2016 Aug 11;9(1):402. doi: 10.1186/s13104-016-2203-3.

15.

Draft Genome Sequence of Bacillus licheniformis CG-B52, a Highly Virulent Bacterium of Pacific White Shrimp (Litopenaeus vannamei), Isolated from a Colombian Caribbean Aquaculture Outbreak.

Gálvez EJ, Carrillo-Castro K, Zárate L, Güiza L, Pieper DH, García-Bonilla E, Salazar M, Junca H.

Genome Announc. 2016 May 12;4(3). pii: e00321-16. doi: 10.1128/genomeA.00321-16.

16.

Microbial and Functional Diversity within the Phyllosphere of Espeletia Species in an Andean High-Mountain Ecosystem.

Ruiz-Pérez CA, Restrepo S, Zambrano MM.

Appl Environ Microbiol. 2016 Jan 8;82(6):1807-1817. doi: 10.1128/AEM.02781-15.

17.

Microbial Toluene Removal in Hypoxic Model Constructed Wetlands Occurs Predominantly via the Ring Monooxygenation Pathway.

Martínez-Lavanchy PM, Chen Z, Lünsmann V, Marin-Cevada V, Vilchez-Vargas R, Pieper DH, Reiche N, Kappelmeyer U, Imparato V, Junca H, Nijenhuis I, Müller JA, Kuschk P, Heipieper HJ.

Appl Environ Microbiol. 2015 Sep;81(18):6241-52. doi: 10.1128/AEM.01822-15. Epub 2015 Jul 6.

18.

Development of a genetic tool for functional screening of anti-malarial bioactive extracts in metagenomic libraries.

Mongui A, Pérez-Llanos FJ, Yamamoto MM, Lozano M, Zambrano MM, Del Portillo P, Fernández-Becerra C, Restrepo S, Del Portillo HA, Junca H.

Malar J. 2015 Jun 4;14:233. doi: 10.1186/s12936-015-0748-6.

19.

Distinct composition signatures of archaeal and bacterial phylotypes in the Wanda Glacier forefield, Antarctic Peninsula.

Pessi IS, Osorio-Forero C, Gálvez EJ, Simões FL, Simões JC, Junca H, Macedo AJ.

FEMS Microbiol Ecol. 2015 Jan;91(1):1-10. doi: 10.1093/femsec/fiu005. Epub 2014 Dec 5.

20.

AromaDeg, a novel database for phylogenomics of aerobic bacterial degradation of aromatics.

Duarte M, Jauregui R, Vilchez-Vargas R, Junca H, Pieper DH.

Database (Oxford). 2014 Dec 1;2014:bau118. doi: 10.1093/database/bau118. Print 2014.

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