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Nat Commun. 2017 May 18;8:15428. doi: 10.1038/ncomms15428.

An optimized strategy to measure protein stability highlights differences between cold and hot unfolded states.

Author information

1
Department of Basic and Clinical Neurosciences, King's College London, London SE5 9RX, UK.
2
Structural Biology Science Technology Platform, The Francis Crick Institute, Mill Hill Laboratory, The Ridgeway, London NW7 1AA, UK.
3
Department of Molecular Medicine, University of Pavia, Pavia 27100, Italy.
4
Dipartimento di Scienze Chimiche, Universita' di Napoli Federico II, Napoli 80126, Italy.

Abstract

Macromolecular crowding ought to stabilize folded forms of proteins, through an excluded volume effect. This explanation has been questioned and observed effects attributed to weak interactions with other cell components. Here we show conclusively that protein stability is affected by volume exclusion and that the effect is more pronounced when the crowder's size is closer to that of the protein under study. Accurate evaluation of the volume exclusion effect is made possible by the choice of yeast frataxin, a protein that undergoes cold denaturation above zero degrees, because the unfolded form at low temperature is more expanded than the corresponding one at high temperature. To achieve optimum sensitivity to changes in stability we introduce an empirical parameter derived from the stability curve. The large effect of PEG 20 on cold denaturation can be explained by a change in water activity, according to Privalov's interpretation of cold denaturation.

PMID:
28516908
PMCID:
PMC5454340
DOI:
10.1038/ncomms15428
[Indexed for MEDLINE]
Free PMC Article

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