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Items: 1 to 20 of 56

1.

The ability of human nuclear DNA to cause false positive low-abundance heteroplasmy calls varies across the mitochondrial genome.

Albayrak L, Khanipov K, Pimenova M, Golovko G, Rojas M, Pavlidis I, Chumakov S, Aguilar G, Chávez A, Widger WR, Fofanov Y.

BMC Genomics. 2016 Dec 12;17(1):1017.

2.

Observations on different resin strategies for affinity purification mass spectrometry of a tagged protein.

Mali S, Moree WJ, Mitchell M, Widger W, Bark SJ.

Anal Biochem. 2016 Dec 15;515:26-32. doi: 10.1016/j.ab.2016.09.022. Epub 2016 Sep 29.

PMID:
27693234
3.

Allele-Specific Reprogramming of Cancer Metabolism by the Long Non-coding RNA CCAT2.

Redis RS, Vela LE, Lu W, Ferreira de Oliveira J, Ivan C, Rodriguez-Aguayo C, Adamoski D, Pasculli B, Taguchi A, Chen Y, Fernandez AF, Valledor L, Van Roosbroeck K, Chang S, Shah M, Kinnebrew G, Han L, Atlasi Y, Cheung LH, Huang GY, Monroig P, Ramirez MS, Catela Ivkovic T, Van L, Ling H, Gafà R, Kapitanovic S, Lanza G, Bankson JA, Huang P, Lai SY, Bast RC, Rosenblum MG, Radovich M, Ivan M, Bartholomeusz G, Liang H, Fraga MF, Widger WR, Hanash S, Berindan-Neagoe I, Lopez-Berestein G, Ambrosio AL, Gomes Dias SM, Calin GA.

Mol Cell. 2016 Feb 18;61(4):520-34. doi: 10.1016/j.molcel.2016.01.015. Epub 2016 Feb 4. Erratum in: Mol Cell. 2016 Feb 18;61(4):640.

4.

Epigenetic alteration by DNA-demethylating treatment restores apoptotic response to glucocorticoids in dexamethasone-resistant human malignant lymphoid cells.

Miller AL, Geng C, Golovko G, Sharma M, Schwartz JR, Yan J, Sowers L, Widger WR, Fofanov Y, Vedeckis WV, Thompson EB.

Cancer Cell Int. 2014 Apr 23;14:35. doi: 10.1186/1475-2867-14-35. eCollection 2014.

5.

Slim-filter: an interactive Windows-based application for illumina genome analyzer data assessment and manipulation.

Golovko G, Khanipov K, Rojas M, Martinez-Alcántara A, Howard JJ, Ballesteros E, Gupta S, Widger W, Fofanov Y.

BMC Bioinformatics. 2012 Jul 16;13:166. doi: 10.1186/1471-2105-13-166.

6.

Intracellular ATP levels are a pivotal determinant of chemoresistance in colon cancer cells.

Zhou Y, Tozzi F, Chen J, Fan F, Xia L, Wang J, Gao G, Zhang A, Xia X, Brasher H, Widger W, Ellis LM, Weihua Z.

Cancer Res. 2012 Jan 1;72(1):304-14. doi: 10.1158/0008-5472.CAN-11-1674. Epub 2011 Nov 14.

7.

Nonlinear dielectric spectroscopy as an indirect probe of metabolic activity in thylakoid membrane.

Fang J, Palanisami A, Rajapakshe K, Widger WR, Miller JH.

Biosensors (Basel). 2011 Jan 31;1(1):13-22. doi: 10.3390/bios1010013.

8.

Localization of superoxide anion production to mitochondrial electron transport chain in 3-NPA-treated cells.

Bacsi A, Woodberry M, Widger W, Papaconstantinou J, Mitra S, Peterson JW, Boldogh I.

Mitochondrion. 2006 Oct;6(5):235-44. Epub 2006 Aug 3.

9.

Harmonic generation by yeast cells in response to low-frequency electric fields.

Nawarathna D, Claycomb JR, Cardenas G, Gardner J, Warmflash D, Miller JH Jr, Widger WR.

Phys Rev E Stat Nonlin Soft Matter Phys. 2006 May;73(5 Pt 1):051914. Epub 2006 May 23.

PMID:
16802974
10.

Cyanobacterial signature genes.

Martin KA, Siefert JL, Yerrapragada S, Lu Y, McNeill TZ, Moreno PA, Weinstock GM, Widger WR, Fox GE.

Photosynth Res. 2003;75(3):211-21.

PMID:
16228602
11.

Fluorine-substituted dihydrobicyclomycins: synthesis and biochemical and biological properties.

Park BS, Widger W, Kohn H.

Bioorg Med Chem. 2006 Jan 1;14(1):41-61. Epub 2005 Sep 26.

PMID:
16185879
12.

The molecular basis for the mode of action of bicyclomycin.

Kohn H, Widger W.

Curr Drug Targets Infect Disord. 2005 Sep;5(3):273-95. Review.

PMID:
16181146
13.
14.

Development of a technique to determine bicyclomycin-rho binding and stoichiometry by isothermal titration calorimetry and mass spectrometry.

Brogan AP, Widger WR, Bensadek D, Riba-Garcia I, Gaskell SJ, Kohn H.

J Am Chem Soc. 2005 Mar 2;127(8):2741-51.

PMID:
15725032
15.

Bismuth-dithiol inhibition of the Escherichia coli rho transcription termination factor.

Brogan AP, Verghese J, Widger WR, Kohn H.

J Inorg Biochem. 2005 Mar;99(3):841-51. Epub 2005 Jan 22.

PMID:
15708806
16.

Thermodynamic and EPR studies of slowly relaxing ubisemiquinone species in the isolated bovine heart complex I.

Ohnishi T, Johnson JE Jr, Yano T, Lobrutto R, Widger WR.

FEBS Lett. 2005 Jan 17;579(2):500-6.

17.

Oxidatively damaged proteins of heart mitochondrial electron transport complexes.

Choksi KB, Boylston WH, Rabek JP, Widger WR, Papaconstantinou J.

Biochim Biophys Acta. 2004 Mar 2;1688(2):95-101.

18.

Metal-1,4-dithio-2,3-dihydroxybutane chelates: novel inhibitors of the Rho transcription termination factor.

Weber TP, Widger WR, Kohn H.

Biochemistry. 2003 Aug 5;42(30):9121-6.

PMID:
12885245
19.

Bicyclomycin fluorescent probes: synthesis and biochemical, biophysical, and biological properties.

Brogan AP, Widger WR, Kohn H.

J Org Chem. 2003 Jul 11;68(14):5575-87.

PMID:
12839449
20.

Metal dependency for transcription factor rho activation.

Weber TP, Widger WR, Kohn H.

Biochemistry. 2003 Feb 18;42(6):1652-9.

PMID:
12578379

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