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Items: 1 to 20 of 219

1.

Additional changes to taxonomy ratified in a special vote by the International Committee on Taxonomy of Viruses (October 2018).

Siddell SG, Walker PJ, Lefkowitz EJ, Mushegian AR, Adams MJ, Dutilh BE, Gorbalenya AE, Harrach B, Harrison RL, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert M, Rubino L, Sabanadzovic S, Sanfaçon H, Simmonds P, Varsani A, Zerbini FM, Davison AJ.

Arch Virol. 2019 Jan 20. doi: 10.1007/s00705-018-04136-2. [Epub ahead of print]

PMID:
30663020
2.

Strengthening the Interaction of the Virology Community with the International Committee on Taxonomy of Viruses (ICTV) by Linking Virus Names and Their Abbreviations to Virus Species.

Calisher CH, Briese T, Rodney Brister J, Charrel RN, Dürrwald R, Ebihara H, Fulhorst CF, Fú Gao G, Groschup MH, Haddow AD, Hyndman TH, Junglen S, Klempa B, Klingström J, Kropinski AM, Krupovic M, LaBeaud AD, Maes P, Nowotny N, Roberto Teixeira Nunes M, Payne SL, Radoshitzky SR, Rubbenstroth D, Sabanadzovic S, Sasaya T, Stenglein MD, Varsani A, Wahl V, Weaver SC, Zerbini FM, Vasilakis N, Kuhn JH.

Syst Biol. 2018 Dec 31. doi: 10.1093/sysbio/syy087. [Epub ahead of print]

PMID:
30597118
3.

Minimum Information about an Uncultivated Virus Genome (MIUViG).

Roux S, Adriaenssens EM, Dutilh BE, Koonin EV, Kropinski AM, Krupovic M, Kuhn JH, Lavigne R, Brister JR, Varsani A, Amid C, Aziz RK, Bordenstein SR, Bork P, Breitbart M, Cochrane GR, Daly RA, Desnues C, Duhaime MB, Emerson JB, Enault F, Fuhrman JA, Hingamp P, Hugenholtz P, Hurwitz BL, Ivanova NN, Labonté JM, Lee KB, Malmstrom RR, Martinez-Garcia M, Mizrachi IK, Ogata H, Páez-Espino D, Petit MA, Putonti C, Rattei T, Reyes A, Rodriguez-Valera F, Rosario K, Schriml L, Schulz F, Steward GF, Sullivan MB, Sunagawa S, Suttle CA, Temperton B, Tringe SG, Thurber RV, Webster NS, Whiteson KL, Wilhelm SW, Wommack KE, Woyke T, Wrighton KC, Yilmaz P, Yoshida T, Young MJ, Yutin N, Allen LZ, Kyrpides NC, Eloe-Fadrosh EA.

Nat Biotechnol. 2018 Dec 17. doi: 10.1038/nbt.4306. [Epub ahead of print]

PMID:
30556814
4.

Genome Sequence of a Single-Stranded DNA Virus Identified in Gila Monster Feces.

Somayaji V, DeNardo D, Wilson Sayres MA, Blake M, Waits K, Fontenele RS, Kraberger S, Varsani A.

Microbiol Resour Announc. 2018 Aug 23;7(7). pii: e00925-18. doi: 10.1128/MRA.00925-18. eCollection 2018 Aug.

5.

Genome Sequence of a Gyrovirus Associated with Ashy Storm-Petrel.

Waits K, Bradley RW, Warzybok P, Kraberger S, Fontenele RS, Varsani A.

Microbiol Resour Announc. 2018 Sep 20;7(11). pii: e00958-18. doi: 10.1128/MRA.00958-18. eCollection 2018 Sep.

6.

Virus discovery in all three major lineages of terrestrial arthropods highlights the diversity of single-stranded DNA viruses associated with invertebrates.

Rosario K, Mettel KA, Benner BE, Johnson R, Scott C, Yusseff-Vanegas SZ, Baker CCM, Cassill DL, Storer C, Varsani A, Breitbart M.

PeerJ. 2018 Oct 11;6:e5761. doi: 10.7717/peerj.5761. eCollection 2018.

7.

Identification of a new turncurtovirus in the leafhopper Circulifer haematoceps and the host plant species Sesamum indicum.

Hasanvand V, Kamali M, Heydarnejad J, Massumi H, Kvarnheden A, Varsani A.

Virus Genes. 2018 Dec;54(6):840-845. doi: 10.1007/s11262-018-1604-x. Epub 2018 Oct 11.

PMID:
30311179
8.

The Westward Journey of Alfalfa Leaf Curl Virus.

Davoodi Z, Bejerman N, Richet C, Filloux D, Kumari SG, Chatzivassiliou EK, Galzi S, Julian C, Samarfard S, Trucco V, Giolitti F, Fiallo-Olivé E, Navas-Castillo J, Asaad N, Moukahel AR, Hijazi J, Mghandef S, Heydarnejad J, Massumi H, Varsani A, Dietzgen RG, Harkins GW, Martin DP, Roumagnac P.

Viruses. 2018 Oct 4;10(10). pii: E542. doi: 10.3390/v10100542.

9.

Notes on recombination and reassortment in multipartite/segmented viruses.

Varsani A, Lefeuvre P, Roumagnac P, Martin D.

Curr Opin Virol. 2018 Dec;33:156-166. doi: 10.1016/j.coviro.2018.08.013. Epub 2018 Sep 17. Review.

PMID:
30237098
10.

Novel circular DNA viruses associated with Apiaceae and Poaceae from South Africa and New Zealand.

Richet C, Kraberger S, Filloux D, Bernardo P, Harkins GW, Martin DP, Roumagnac P, Varsani A.

Arch Virol. 2019 Jan;164(1):237-242. doi: 10.1007/s00705-018-4031-3. Epub 2018 Sep 15.

PMID:
30220037
11.

Genomoviruses associated with mountain and western pine beetles.

Kraberger S, Hofstetter RW, Potter KA, Farkas K, Varsani A.

Virus Res. 2018 Sep 2;256:17-20. doi: 10.1016/j.virusres.2018.07.019. Epub 2018 Jul 27.

PMID:
30059700
12.

Correction to: Smacoviridae: a new family of animal-associated single-stranded DNA viruses.

Varsani A, Krupovic M.

Arch Virol. 2018 Nov;163(11):3213-3214. doi: 10.1007/s00705-018-3960-1.

PMID:
30054745
13.

Novel anelloviruses identified in buccal swabs of Antarctic fur seals.

Crane A, Goebel ME, Kraberger S, Stone AC, Varsani A.

Virus Genes. 2018 Oct;54(5):719-723. doi: 10.1007/s11262-018-1585-9. Epub 2018 Jul 3.

PMID:
29971737
14.

Multiscale Currents Observed by MMS in the Flow Braking Region.

Nakamura R, Varsani A, Genestreti KJ, Le Contel O, Nakamura T, Baumjohann W, Nagai T, Artemyev A, Birn J, Sergeev VA, Apatenkov S, Ergun RE, Fuselier SA, Gershman DJ, Giles BJ, Khotyaintsev YV, Lindqvist PA, Magnes W, Mauk B, Petrukovich A, Russell CT, Stawarz J, Strangeway RJ, Anderson B, Burch JL, Bromund KR, Cohen I, Fischer D, Jaynes A, Kepko L, Le G, Plaschke F, Reeves G, Singer HJ, Slavin JA, Torbert RB, Turner DL.

J Geophys Res Space Phys. 2018 Feb;123(2):1260-1278. doi: 10.1002/2017JA024686. Epub 2018 Feb 20.

15.

From Spatial Metagenomics to Molecular Characterization of Plant Viruses: A Geminivirus Case Study.

Claverie S, Bernardo P, Kraberger S, Hartnady P, Lefeuvre P, Lett JM, Galzi S, Filloux D, Harkins GW, Varsani A, Martin DP, Roumagnac P.

Adv Virus Res. 2018;101:55-83. doi: 10.1016/bs.aivir.2018.02.003. Epub 2018 May 7. Review.

PMID:
29908594
16.

Identification of circular single-stranded DNA viruses in faecal samples of Canada lynx (Lynx canadensis), moose (Alces alces) and snowshoe hare (Lepus americanus) inhabiting the Colorado San Juan Mountains.

Kraberger S, Waits K, Ivan J, Newkirk E, VandeWoude S, Varsani A.

Infect Genet Evol. 2018 Oct;64:1-8. doi: 10.1016/j.meegid.2018.06.001. Epub 2018 Jun 4.

PMID:
29879480
17.

Changes to taxonomy and the International Code of Virus Classification and Nomenclature ratified by the International Committee on Taxonomy of Viruses (2018).

King AMQ, Lefkowitz EJ, Mushegian AR, Adams MJ, Dutilh BE, Gorbalenya AE, Harrach B, Harrison RL, Junglen S, Knowles NJ, Kropinski AM, Krupovic M, Kuhn JH, Nibert ML, Rubino L, Sabanadzovic S, Sanfaçon H, Siddell SG, Simmonds P, Varsani A, Zerbini FM, Davison AJ.

Arch Virol. 2018 May 12. doi: 10.1007/s00705-018-3847-1. [Epub ahead of print]

PMID:
29754305
18.

Alphasatellitidae: a new family with two subfamilies for the classification of geminivirus- and nanovirus-associated alphasatellites.

Briddon RW, Martin DP, Roumagnac P, Navas-Castillo J, Fiallo-Olivé E, Moriones E, Lett JM, Zerbini FM, Varsani A.

Arch Virol. 2018 May 9. doi: 10.1007/s00705-018-3854-2. [Epub ahead of print]

PMID:
29740680
19.

Pervasive Chimerism in the Replication-Associated Proteins of Uncultured Single-Stranded DNA Viruses.

Kazlauskas D, Varsani A, Krupovic M.

Viruses. 2018 Apr 10;10(4). pii: E187. doi: 10.3390/v10040187.

20.

Passion Fruit Chlorotic Mottle Virus: Molecular Characterization of a New Divergent Geminivirus in Brazil.

Fontenele RS, Abreu RA, Lamas NS, Alves-Freitas DMT, Vidal AH, Poppiel RR, Melo FL, Lacorte C, Martin DP, Campos MA, Varsani A, Ribeiro SG.

Viruses. 2018 Apr 2;10(4). pii: E169. doi: 10.3390/v10040169.

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