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Items: 1 to 20 of 44

1.

Building (Viral) Phylogenetic Trees Using a Maximum Likelihood Approach.

King KM, Van Doorslaer K.

Curr Protoc Microbiol. 2018 Nov;51(1):e63. doi: 10.1002/cpmc.63. Epub 2018 Sep 28.

PMID:
30265446
2.

ICTV Virus Taxonomy Profile: Papillomaviridae.

Van Doorslaer K, Chen Z, Bernard HU, Chan PKS, DeSalle R, Dillner J, Forslund O, Haga T, McBride AA, Villa LL, Burk RD, Ictv Report Consortium.

J Gen Virol. 2018 Aug;99(8):989-990. doi: 10.1099/jgv.0.001105. Epub 2018 Jun 21.

3.

Fish polyomaviruses belong to two distinct evolutionary lineages.

Van Doorslaer K, Kraberger S, Austin C, Farkas K, Bergeman M, Paunil E, Davison W, Varsani A.

J Gen Virol. 2018 Apr;99(4):567-573. doi: 10.1099/jgv.0.001041. Epub 2018 Mar 8.

4.

Diverse papillomaviruses identified in Weddell seals.

Smeele ZE, Burns JM, Van Doorsaler K, Fontenele RS, Waits K, Stainton D, Shero MR, Beltran RS, Kirkham AL, Berngartt R, Kraberger S, Varsani A.

J Gen Virol. 2018 Apr;99(4):549-557. doi: 10.1099/jgv.0.001028. Epub 2018 Feb 22.

PMID:
29469687
5.

Persistence of an Oncogenic Papillomavirus Genome Requires cis Elements from the Viral Transcriptional Enhancer.

Van Doorslaer K, Chen D, Chapman S, Khan J, McBride AA.

MBio. 2017 Nov 21;8(6). pii: e01758-17. doi: 10.1128/mBio.01758-17.

6.

Unique genome organization of non-mammalian papillomaviruses provides insights into the evolution of viral early proteins.

Van Doorslaer K, Ruoppolo V, Schmidt A, Lescroƫl A, Jongsomjit D, Elrod M, Kraberger S, Stainton D, Dugger KM, Ballard G, Ainley DG, Varsani A.

Virus Evol. 2017 Oct 6;3(2):vex027. doi: 10.1093/ve/vex027. eCollection 2017 Jul.

7.

Roles of APOBEC3A and APOBEC3B in Human Papillomavirus Infection and Disease Progression.

Warren CJ, Westrich JA, Doorslaer KV, Pyeon D.

Viruses. 2017 Aug 21;9(8). pii: E233. doi: 10.3390/v9080233. Review.

8.

The Papillomavirus Episteme: a major update to the papillomavirus sequence database.

Van Doorslaer K, Li Z, Xirasagar S, Maes P, Kaminsky D, Liou D, Sun Q, Kaur R, Huyen Y, McBride AA.

Nucleic Acids Res. 2017 Jan 4;45(D1):D499-D506. doi: 10.1093/nar/gkw879. Epub 2016 Oct 5.

9.

Novel recombinant papillomavirus genomes expressing selectable genes.

Van Doorslaer K, Porter S, McKinney C, Stepp WH, McBride AA.

Sci Rep. 2016 Nov 28;6:37782. doi: 10.1038/srep37782.

10.

Detection and Genotyping of Human Papillomaviruses from Archival Formalin-Fixed Tissue Samples.

Van Doorslaer K, Chen Z, McBride AA.

Curr Protoc Microbiol. 2016 Nov 18;43:14B.9.1-14B.9.20. doi: 10.1002/cpmc.16.

11.

Molecular archeological evidence in support of the repeated loss of a papillomavirus gene.

Van Doorslaer K, McBride AA.

Sci Rep. 2016 Sep 8;6:33028. doi: 10.1038/srep33028.

12.

The Ancient Evolutionary History of Polyomaviruses.

Buck CB, Van Doorslaer K, Peretti A, Geoghegan EM, Tisza MJ, An P, Katz JP, Pipas JM, McBride AA, Camus AC, McDermott AJ, Dill JA, Delwart E, Ng TF, Farkas K, Austin C, Kraberger S, Davison W, Pastrana DV, Varsani A.

PLoS Pathog. 2016 Apr 19;12(4):e1005574. doi: 10.1371/journal.ppat.1005574. eCollection 2016 Apr.

13.

Data in support of UbSRD: The Ubiquitin Structural Relational Database.

Harrison JS, Jacobs TM, Houlihan K, Van Doorslaer K, Kuhlman B.

Data Brief. 2015 Oct 19;5:605-15. doi: 10.1016/j.dib.2015.10.007. eCollection 2015 Dec.

14.

UbSRD: The Ubiquitin Structural Relational Database.

Harrison JS, Jacobs TM, Houlihan K, Van Doorslaer K, Kuhlman B.

J Mol Biol. 2016 Feb 22;428(4):679-687. doi: 10.1016/j.jmb.2015.09.011. Epub 2015 Sep 25.

15.

Degradation of Human PDZ-Proteins by Human Alphapapillomaviruses Represents an Evolutionary Adaptation to a Novel Cellular Niche.

Van Doorslaer K, DeSalle R, Einstein MH, Burk RD.

PLoS Pathog. 2015 Jun 18;11(6):e1004980. doi: 10.1371/journal.ppat.1004980. eCollection 2015 Jun.

16.

A proteomic approach to discover and compare interacting partners of papillomavirus E2 proteins from diverse phylogenetic groups.

Jang MK, Anderson DE, van Doorslaer K, McBride AA.

Proteomics. 2015 Jun;15(12):2038-50. doi: 10.1002/pmic.201400613. Epub 2015 Apr 28.

17.

Role of the host restriction factor APOBEC3 on papillomavirus evolution.

Warren CJ, Van Doorslaer K, Pandey A, Espinosa JM, Pyeon D.

Virus Evol. 2015 Jan;1(1). pii: vev015. Epub 2015 Jan 1.

18.

Evolution of the papillomaviridae.

Van Doorslaer K.

Virology. 2013 Oct;445(1-2):11-20. doi: 10.1016/j.virol.2013.05.012. Epub 2013 Jun 14. Review.

19.

Condylomatous genital lesions in cynomolgus macaques from Mauritius.

Harari A, Wood CE, Van Doorslaer K, Chen Z, Domaingue MC, Elmore D, Koenig P, Wagner JD, Jennings RN, Burk RD.

Toxicol Pathol. 2013 Aug;41(6):893-901. doi: 10.1177/0192623312467521. Epub 2012 Dec 21.

20.

The Papillomavirus Episteme: a central resource for papillomavirus sequence data and analysis.

Van Doorslaer K, Tan Q, Xirasagar S, Bandaru S, Gopalan V, Mohamoud Y, Huyen Y, McBride AA.

Nucleic Acids Res. 2013 Jan;41(Database issue):D571-8. doi: 10.1093/nar/gks984. Epub 2012 Oct 23.

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