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Items: 1 to 20 of 544

1.

Functional characterization of 3D protein structures informed by human genetic diversity.

Hicks M, Bartha I, di Iulio J, Venter JC, Telenti A.

Proc Natl Acad Sci U S A. 2019 Apr 15. pii: 201820813. doi: 10.1073/pnas.1820813116. [Epub ahead of print]

2.

Entry of Polarized Effector Cells into Quiescence Forces HIV Latency.

Dobrowolski C, Valadkhan S, Graham AC, Shukla M, Ciuffi A, Telenti A, Karn J.

MBio. 2019 Mar 26;10(2). pii: e00337-19. doi: 10.1128/mBio.00337-19.

3.

Proteo-Transcriptomic Dynamics of Cellular Response to HIV-1 Infection.

Golumbeanu M, Desfarges S, Hernandez C, Quadroni M, Rato S, Mohammadi P, Telenti A, Beerenwinkel N, Ciuffi A.

Sci Rep. 2019 Jan 18;9(1):213. doi: 10.1038/s41598-018-36135-3.

4.

Response to Whiffin et al.

Shah N, Claire Hou YC, Yu HC, Sainger R, Caskey CT, Venter JC, Telenti A.

Am J Hum Genet. 2019 Jan 3;104(1):186. doi: 10.1016/j.ajhg.2018.11.011. No abstract available.

PMID:
30609405
5.

A primer on deep learning in genomics.

Zou J, Huss M, Abid A, Mohammadi P, Torkamani A, Telenti A.

Nat Genet. 2019 Jan;51(1):12-18. doi: 10.1038/s41588-018-0295-5. Epub 2018 Nov 26. Review.

PMID:
30478442
6.

Integrating metabolomics with genomics.

Telenti A.

Pharmacogenomics. 2018 Dec;19(18):1377-1381. doi: 10.2217/pgs-2018-0155. Epub 2018 Nov 6. No abstract available.

PMID:
30398072
7.

Profound Perturbation of the Metabolome in Obesity Is Associated with Health Risk.

Cirulli ET, Guo L, Leon Swisher C, Shah N, Huang L, Napier LA, Kirkness EF, Spector TD, Caskey CT, Thorens B, Venter JC, Telenti A.

Cell Metab. 2019 Feb 5;29(2):488-500.e2. doi: 10.1016/j.cmet.2018.09.022. Epub 2018 Oct 11.

8.

Chromosome Y-encoded antigens associate with acute graft-versus-host disease in sex-mismatched stem cell transplant.

Wang W, Huang H, Halagan M, Vierra-Green C, Heuer M, Brelsford JE, Haagenson M, Scheuermann RH, Telenti A, Biggs W, Pearson NM, Udell J, Spellman S, Maiers M, Kennedy CJ.

Blood Adv. 2018 Oct 9;2(19):2419-2429. doi: 10.1182/bloodadvances.2018019513.

9.

Novel insight into the genetic basis of high-altitude pulmonary hypertension in Kyrgyz highlanders.

Iranmehr A, Stobdan T, Zhou D, Poulsen O, Strohl KP, Aldashev A, Telenti A, Wong EHM, Kirkness EF, Venter JC, Bafna V, Haddad GG.

Eur J Hum Genet. 2019 Jan;27(1):150-159. doi: 10.1038/s41431-018-0270-8. Epub 2018 Sep 25.

PMID:
30254217
10.

IFT88 mutations identified in individuals with non-syndromic recessive retinal degeneration result in abnormal ciliogenesis.

Chekuri A, Guru AA, Biswas P, Branham K, Borooah S, Soto-Hermida A, Hicks M, Khan NW, Matsui H, Alapati A, Raghavendra PB, Roosing S, Sarangapani S, Mathavan S, Telenti A, Heckenlively JR, Riazuddin SA, Frazer KA, Sieving PA, Ayyagari R.

Hum Genet. 2018 Jul;137(6-7):447-458. doi: 10.1007/s00439-018-1897-9. Epub 2018 Jul 5.

PMID:
29978320
11.

The fecal metabolome as a functional readout of the gut microbiome.

Zierer J, Jackson MA, Kastenmüller G, Mangino M, Long T, Telenti A, Mohney RP, Small KS, Bell JT, Steves CJ, Valdes AM, Spector TD, Menni C.

Nat Genet. 2018 Jun;50(6):790-795. doi: 10.1038/s41588-018-0135-7. Epub 2018 May 28.

12.

The Antiviral Activity of the Cellular Glycoprotein LGALS3BP/90K Is Species Specific.

Lodermeyer V, Ssebyatika G, Passos V, Ponnurangam A, Malassa A, Ewald E, Stürzel CM, Kirchhoff F, Rotger M, Falk CS, Telenti A, Krey T, Goffinet C.

J Virol. 2018 Jun 29;92(14). pii: e00226-18. doi: 10.1128/JVI.00226-18. Print 2018 Jul 15.

13.

Paternally inherited cis-regulatory structural variants are associated with autism.

Brandler WM, Antaki D, Gujral M, Kleiber ML, Whitney J, Maile MS, Hong O, Chapman TR, Tan S, Tandon P, Pang T, Tang SC, Vaux KK, Yang Y, Harrington E, Juul S, Turner DJ, Thiruvahindrapuram B, Kaur G, Wang Z, Kingsmore SF, Gleeson JG, Bisson D, Kakaradov B, Telenti A, Venter JC, Corominas R, Toma C, Cormand B, Rueda I, Guijarro S, Messer KS, Nievergelt CM, Arranz MJ, Courchesne E, Pierce K, Muotri AR, Iakoucheva LM, Hervas A, Scherer SW, Corsello C, Sebat J.

Science. 2018 Apr 20;360(6386):327-331. doi: 10.1126/science.aan2261.

14.

Deep learning of genomic variation and regulatory network data.

Telenti A, Lippert C, Chang PC, DePristo M.

Hum Mol Genet. 2018 May 1;27(R1):R63-R71. doi: 10.1093/hmg/ddy115.

PMID:
29648622
15.

Identification of Misclassified ClinVar Variants via Disease Population Prevalence.

Shah N, Hou YC, Yu HC, Sainger R, Caskey CT, Venter JC, Telenti A.

Am J Hum Genet. 2018 Apr 5;102(4):609-619. doi: 10.1016/j.ajhg.2018.02.019.

16.

Comparison of phasing strategies for whole human genomes.

Choi Y, Chan AP, Kirkness E, Telenti A, Schork NJ.

PLoS Genet. 2018 Apr 5;14(4):e1007308. doi: 10.1371/journal.pgen.1007308. eCollection 2018 Apr.

17.

Rethinking the medical record.

Telenti A, Steinhubl SR, Topol EJ.

Lancet. 2018 Mar 17;391(10125):1013. doi: 10.1016/S0140-6736(18)30538-5. Epub 2018 Mar 15. No abstract available.

PMID:
29565009
18.

Microbial metagenome of urinary tract infection.

Moustafa A, Li W, Singh H, Moncera KJ, Torralba MG, Yu Y, Manuel O, Biggs W, Venter JC, Nelson KE, Pieper R, Telenti A.

Sci Rep. 2018 Mar 12;8(1):4333. doi: 10.1038/s41598-018-22660-8.

19.

The human noncoding genome defined by genetic diversity.

di Iulio J, Bartha I, Wong EHM, Yu HC, Lavrenko V, Yang D, Jung I, Hicks MA, Shah N, Kirkness EF, Fabani MM, Biggs WH, Ren B, Venter JC, Telenti A.

Nat Genet. 2018 Mar;50(3):333-337. doi: 10.1038/s41588-018-0062-7. Epub 2018 Feb 26.

PMID:
29483654
20.

Acetaminophen (Paracetamol) Use Modifies the Sulfation of Sex Hormones.

Cohen IV, Cirulli ET, Mitchell MW, Jonsson TJ, Yu J, Shah N, Spector TD, Guo L, Venter JC, Telenti A.

EBioMedicine. 2018 Feb;28:316-323. doi: 10.1016/j.ebiom.2018.01.033. Epub 2018 Feb 15.

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