Suthers PF[Author] - Search Results

Year	Number of Results
2002	1
2007	2
2008	1
2009	4
2010	2
2011	2
2012	3
2019	1
2020	3
2021	2
2022	1
2023	2
2024	1

1

Building kinetic models for metabolic engineering.

Foster CJ, Wang L, Dinh HV, Suthers PF, Maranas CD. Foster CJ, et al. Among authors: suthers pf. Curr Opin Biotechnol. 2021 Feb;67:35-41. doi: 10.1016/j.copbio.2020.11.010. Epub 2020 Dec 24. Curr Opin Biotechnol. 2021. PMID: 33360621 Review.

2

Mathematical optimization applications in metabolic networks.

Zomorrodi AR, Suthers PF, Ranganathan S, Maranas CD. Zomorrodi AR, et al. Among authors: suthers pf. Metab Eng. 2012 Nov;14(6):672-86. doi: 10.1016/j.ymben.2012.09.005. Epub 2012 Sep 28. Metab Eng. 2012. PMID: 23026121 Review.

3

Recent advances in constraint and machine learning-based metabolic modeling by leveraging stoichiometric balances, thermodynamic feasibility and kinetic law formalisms.

Suthers PF, Foster CJ, Sarkar D, Wang L, Maranas CD. Suthers PF, et al. Metab Eng. 2021 Jan;63:13-33. doi: 10.1016/j.ymben.2020.11.013. Epub 2020 Dec 10. Metab Eng. 2021. PMID: 33310118 Review.

4

Examining organic acid production potential and growth-coupled strategies in Issatchenkia orientalis using constraint-based modeling.

Suthers PF, Maranas CD. Suthers PF, et al. Biotechnol Prog. 2022 Sep;38(5):e3276. doi: 10.1002/btpr.3276. Epub 2022 Jun 28. Biotechnol Prog. 2022. PMID: 35603544 Free PMC article.

5

Comparative study of two Saccharomyces cerevisiae strains with kinetic models at genome-scale.

Hu M, Dinh HV, Shen Y, Suthers PF, Foster CJ, Call CM, Ye X, Pratas J, Fatma Z, Zhao H, Rabinowitz JD, Maranas CD. Hu M, et al. Among authors: suthers pf. Metab Eng. 2023 Mar;76:1-17. doi: 10.1016/j.ymben.2023.01.001. Epub 2023 Jan 2. Metab Eng. 2023. PMID: 36603705 Free article.

6

Metabolic engineering of low-pH-tolerant non-model yeast, Issatchenkia orientalis, for production of citramalate.

Wu ZY, Sun W, Shen Y, Pratas J, Suthers PF, Hsieh PH, Dwaraknath S, Rabinowitz JD, Maranas CD, Shao Z, Yoshikuni Y. Wu ZY, et al. Among authors: suthers pf. Metab Eng Commun. 2023 Feb 16;16:e00220. doi: 10.1016/j.mec.2023.e00220. eCollection 2023 Jun. Metab Eng Commun. 2023. PMID: 36860699 Free PMC article.

7

Orchestrating hi-fi annotations.

Suthers PF, Maranas CD. Suthers PF, et al. Nat Chem Biol. 2012 Oct;8(10):810-1. doi: 10.1038/nchembio.1067. Nat Chem Biol. 2012. PMID: 22987007

8

KETCHUP: Parameterizing of large-scale kinetic models using multiple datasets with different reference states.

Hu M, Suthers PF, Maranas CD. Hu M, et al. Among authors: suthers pf. Metab Eng. 2024 Mar;82:123-133. doi: 10.1016/j.ymben.2024.02.002. Epub 2024 Feb 7. Metab Eng. 2024. PMID: 38336004

9

A comprehensive genome-scale model for Rhodosporidium toruloides IFO0880 accounting for functional genomics and phenotypic data.

Dinh HV, Suthers PF, Chan SHJ, Shen Y, Xiao T, Deewan A, Jagtap SS, Zhao H, Rao CV, Rabinowitz JD, Maranas CD. Dinh HV, et al. Among authors: suthers pf. Metab Eng Commun. 2019 Aug 28;9:e00101. doi: 10.1016/j.mec.2019.e00101. eCollection 2019 Dec. Metab Eng Commun. 2019. PMID: 31720216 Free PMC article.

10

Genome-scale metabolic reconstruction of the non-model yeast Issatchenkia orientalis SD108 and its application to organic acids production.

Suthers PF, Dinh HV, Fatma Z, Shen Y, Chan SHJ, Rabinowitz JD, Zhao H, Maranas CD. Suthers PF, et al. Metab Eng Commun. 2020 Oct 8;11:e00148. doi: 10.1016/j.mec.2020.e00148. eCollection 2020 Dec. Metab Eng Commun. 2020. PMID: 33134082 Free PMC article.

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