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Ets21c Governs Tissue Renewal, Stress Tolerance, and Aging in the Drosophila Intestine.

Mundorf J, Donohoe CD, McClure CD, Southall TD, Uhlirova M.

Cell Rep. 2019 Jun 4;27(10):3019-3033.e5. doi: 10.1016/j.celrep.2019.05.025.


fs(1)h controls metabolic and immune function and enhances survival via AKT and FOXO in Drosophila.

Sharrock J, Estacio-Gomez A, Jacobson J, Kierdorf K, Southall TD, Dionne MS.

Dis Model Mech. 2019 Apr 4;12(4). pii: dmm037259. doi: 10.1242/dmm.037259.


DamID as a versatile tool for understanding gene regulation.

Aughey GN, Cheetham SW, Southall TD.

Development. 2019 Mar 15;146(6). pii: dev173666. doi: 10.1242/dev.173666. Review.


Neuroblast-specific open chromatin allows the temporal transcription factor, Hunchback, to bind neuroblast-specific loci.

Sen SQ, Chanchani S, Southall TD, Doe CQ.

Elife. 2019 Jan 29;8. pii: e44036. doi: 10.7554/eLife.44036.


Targeted DamID reveals differential binding of mammalian pluripotency factors.

Cheetham SW, Gruhn WH, van den Ameele J, Krautz R, Southall TD, Kobayashi T, Surani MA, Brand AH.

Development. 2018 Oct 17;145(20). pii: dev170209. doi: 10.1242/dev.170209.


CATaDa reveals global remodelling of chromatin accessibility during stem cell differentiation in vivo.

Aughey GN, Estacio Gomez A, Thomson J, Yin H, Southall TD.

Elife. 2018 Feb 26;7. pii: e32341. doi: 10.7554/eLife.32341.


Comprehensive Characterization of the Complex lola Locus Reveals a Novel Role in the Octopaminergic Pathway via Tyramine Beta-Hydroxylase Regulation.

Dinges N, Morin V, Kreim N, Southall TD, Roignant JY.

Cell Rep. 2017 Dec 5;21(10):2911-2925. doi: 10.1016/j.celrep.2017.11.015.


Cell-type-specific profiling of protein-DNA interactions without cell isolation using targeted DamID with next-generation sequencing.

Marshall OJ, Southall TD, Cheetham SW, Brand AH.

Nat Protoc. 2016 Sep;11(9):1586-98. doi: 10.1038/nprot.2016.084. Epub 2016 Aug 4.


Functional Conservation of the Glide/Gcm Regulatory Network Controlling Glia, Hemocyte, and Tendon Cell Differentiation in Drosophila.

Cattenoz PB, Popkova A, Southall TD, Aiello G, Brand AH, Giangrande A.

Genetics. 2016 Jan;202(1):191-219. doi: 10.1534/genetics.115.182154. Epub 2015 Nov 13.


Getting Down to Specifics: Profiling Gene Expression and Protein-DNA Interactions in a Cell Type-Specific Manner.

McClure CD, Southall TD.

Adv Genet. 2015;91:103-151. doi: 10.1016/bs.adgen.2015.06.003. Epub 2015 Jul 23. Review.


Dam it's good! DamID profiling of protein-DNA interactions.

Aughey GN, Southall TD.

Wiley Interdiscip Rev Dev Biol. 2016 Jan-Feb;5(1):25-37. doi: 10.1002/wdev.205. Epub 2015 Sep 18. Review.


Regulation of Drosophila intestinal stem cell maintenance and differentiation by the transcription factor Escargot.

Loza-Coll MA, Southall TD, Sandall SL, Brand AH, Jones DL.

EMBO J. 2014 Dec 17;33(24):2983-96. doi: 10.15252/embj.201489050. Epub 2014 Nov 27.


Escargot maintains stemness and suppresses differentiation in Drosophila intestinal stem cells.

Korzelius J, Naumann SK, Loza-Coll MA, Chan JS, Dutta D, Oberheim J, Gläßer C, Southall TD, Brand AH, Jones DL, Edgar BA.

EMBO J. 2014 Dec 17;33(24):2967-82. doi: 10.15252/embj.201489072. Epub 2014 Oct 8.


Dedifferentiation of neurons precedes tumor formation in Lola mutants.

Southall TD, Davidson CM, Miller C, Carr A, Brand AH.

Dev Cell. 2014 Mar 31;28(6):685-96. doi: 10.1016/j.devcel.2014.01.030. Epub 2014 Mar 13.


The transcription factors islet and Lim3 combinatorially regulate ion channel gene expression.

Wolfram V, Southall TD, Günay C, Prinz AA, Brand AH, Baines RA.

J Neurosci. 2014 Feb 12;34(7):2538-43. doi: 10.1523/JNEUROSCI.4511-13.2014.


Cell-type-specific profiling of gene expression and chromatin binding without cell isolation: assaying RNA Pol II occupancy in neural stem cells.

Southall TD, Gold KS, Egger B, Davidson CM, Caygill EE, Marshall OJ, Brand AH.

Dev Cell. 2013 Jul 15;26(1):101-12. doi: 10.1016/j.devcel.2013.05.020. Epub 2013 Jun 20.


Snail-dependent repression of the RhoGEF pebble is required for gastrulation consistency in Drosophila melanogaster.

Murray MJ, Southall TD, Liu W, Fraval H, Lorensuhewa N, Brand AH, Saint R.

Dev Genes Evol. 2012 Nov;222(6):361-8. doi: 10.1007/s00427-012-0414-8. Epub 2012 Sep 4.


The LIM-homeodomain protein islet dictates motor neuron electrical properties by regulating K(+) channel expression.

Wolfram V, Southall TD, Brand AH, Baines RA.

Neuron. 2012 Aug 23;75(4):663-74. doi: 10.1016/j.neuron.2012.06.015.


Transcriptional control of stem cell maintenance in the Drosophila intestine.

Bardin AJ, Perdigoto CN, Southall TD, Brand AH, Schweisguth F.

Development. 2010 Mar;137(5):705-14. doi: 10.1242/dev.039404.


Neural stem cell transcriptional networks highlight genes essential for nervous system development.

Southall TD, Brand AH.

EMBO J. 2009 Dec 16;28(24):3799-807. doi: 10.1038/emboj.2009.309.

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