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The impact of DNA methylation on the cancer proteome.
Magzoub MM, Prunello M, Brennan K, Gevaert O. Magzoub MM, et al. Among authors: prunello m. PLoS Comput Biol. 2019 Jul 29;15(7):e1007245. doi: 10.1371/journal.pcbi.1007245. eCollection 2019 Jul. PLoS Comput Biol. 2019. PMID: 31356589 Free PMC article.
Genomic, Pathway Network, and Immunologic Features Distinguishing Squamous Carcinomas.
Campbell JD, Yau C, Bowlby R, Liu Y, Brennan K, Fan H, Taylor AM, Wang C, Walter V, Akbani R, Byers LA, Creighton CJ, Coarfa C, Shih J, Cherniack AD, Gevaert O, Prunello M, Shen H, Anur P, Chen J, Cheng H, Hayes DN, Bullman S, Pedamallu CS, Ojesina AI, Sadeghi S, Mungall KL, Robertson AG, Benz C, Schultz A, Kanchi RS, Gay CM, Hegde A, Diao L, Wang J, Ma W, Sumazin P, Chiu HS, Chen TW, Gunaratne P, Donehower L, Rader JS, Zuna R, Al-Ahmadie H, Lazar AJ, Flores ER, Tsai KY, Zhou JH, Rustgi AK, Drill E, Shen R, Wong CK; Cancer Genome Atlas Research Network; Stuart JM, Laird PW, Hoadley KA, Weinstein JN, Peto M, Pickering CR, Chen Z, Van Waes C. Campbell JD, et al. Among authors: prunello m. Cell Rep. 2018 Apr 3;23(1):194-212.e6. doi: 10.1016/j.celrep.2018.03.063. Cell Rep. 2018. PMID: 29617660 Free PMC article.
GeM-Pro: a tool for genome functional mining and microbial profiling.
Torres Manno MA, Pizarro MD, Prunello M, Magni C, Daurelio LD, Espariz M. Torres Manno MA, et al. Among authors: prunello m. Appl Microbiol Biotechnol. 2019 Apr;103(7):3123-3134. doi: 10.1007/s00253-019-09648-8. Epub 2019 Feb 7. Appl Microbiol Biotechnol. 2019. PMID: 30729287