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2018 | 2 |
2023 | 2 |
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Systematic assessment of long-read RNA-seq methods for transcript identification and quantification.
bioRxiv [Preprint]. 2023 Jul 27:2023.07.25.550582. doi: 10.1101/2023.07.25.550582.
bioRxiv. 2023.
PMID: 37546854
Free PMC article.
Preprint.
SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms.
Pardo-Palacios FJ, Arzalluz-Luque A, Kondratova L, Salguero P, Mestre-Tomás J, Amorín R, Estevan-Morió E, Liu T, Nanni A, McIntyre L, Tseng E, Conesa A.
Pardo-Palacios FJ, et al.
bioRxiv [Preprint]. 2023 Jun 3:2023.05.17.541248. doi: 10.1101/2023.05.17.541248.
bioRxiv. 2023.
PMID: 37398077
Free PMC article.
Updated.
Preprint.
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SQANTI3: curation of long-read transcriptomes for accurate identification of known and novel isoforms.
Pardo-Palacios FJ, Arzalluz-Luque A, Kondratova L, Salguero P, Mestre-Tomás J, Amorín R, Estevan-Morió E, Liu T, Nanni A, McIntyre L, Tseng E, Conesa A.
Pardo-Palacios FJ, et al.
Nat Methods. 2024 Mar 20. doi: 10.1038/s41592-024-02229-2. Online ahead of print.
Nat Methods. 2024.
PMID: 38509328
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SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A.
Tardaguila M, et al. Among authors: pardo palacios fj.
Genome Res. 2018 Feb 9;28(3):396-411. doi: 10.1101/gr.222976.117. Online ahead of print.
Genome Res. 2018.
PMID: 29440222
Free PMC article.
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Corrigendum: SQANTI: extensive characterization of long-read transcript sequences for quality control in full-length transcriptome identification and quantification.
Tardaguila M, de la Fuente L, Marti C, Pereira C, Pardo-Palacios FJ, Del Risco H, Ferrell M, Mellado M, Macchietto M, Verheggen K, Edelmann M, Ezkurdia I, Vazquez J, Tress M, Mortazavi A, Martens L, Rodriguez-Navarro S, Moreno-Manzano V, Conesa A.
Tardaguila M, et al. Among authors: pardo palacios fj.
Genome Res. 2018 Jul;28(7):1096. doi: 10.1101/gr.239137.118.
Genome Res. 2018.
PMID: 29967126
Free PMC article.
No abstract available.
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