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Items: 1 to 20 of 126

1.

Transgenerational effects of inter-ploidy cross direction on reproduction and F2 seed development of Arabidopsis thaliana F1 hybrid triploids.

Duszynska D, Vilhjalmsson B, Castillo Bravo R, Swamidatta S, Juenger TE, Donoghue MTA, Comte A, Nordborg M, Sharbel TF, Brychkova G, McKeown PC, Spillane C.

Plant Reprod. 2019 Sep;32(3):275-289. doi: 10.1007/s00497-019-00369-6. Epub 2019 Mar 21.

2.

Why structure matters.

Barton N, Hermisson J, Nordborg M.

Elife. 2019 Mar 21;8. pii: e45380. doi: 10.7554/eLife.45380.

3.

Eco-Metabolomics and Metabolic Modeling: Making the Leap From Model Systems in the Lab to Native Populations in the Field.

Nagler M, Nägele T, Gilli C, Fragner L, Korte A, Platzer A, Farlow A, Nordborg M, Weckwerth W.

Front Plant Sci. 2018 Nov 6;9:1556. doi: 10.3389/fpls.2018.01556. eCollection 2018.

4.

Publisher Correction: Ancient hybridization and strong adaptation to viruses across African vervet monkey populations.

Svardal H, Jasinska AJ, Apetrei C, Coppola G, Huang Y, Schmitt CA, Jacquelin B, Ramensky V, Müller-Trutwin M, Antonio M, Weinstock G, Grobler JP, Dewar K, Wilson RK, Turner TR, Warren WC, Freimer NB, Nordborg M.

Nat Genet. 2018 Nov;50(11):1617. doi: 10.1038/s41588-018-0124-x.

5.

The Aquilegia genome provides insight into adaptive radiation and reveals an extraordinarily polymorphic chromosome with a unique history.

Filiault DL, Ballerini ES, Mandáková T, Aköz G, Derieg NJ, Schmutz J, Jenkins J, Grimwood J, Shu S, Hayes RD, Hellsten U, Barry K, Yan J, Mihaltcheva S, Karafiátová M, Nizhynska V, Kramer EM, Lysak MA, Hodges SA, Nordborg M.

Elife. 2018 Oct 16;7. pii: e36426. doi: 10.7554/eLife.36426.

6.

GWAS with Heterogeneous Data: Estimating the Fraction of Phenotypic Variation Mediated by Gene Expression Data.

Sasaki E, Frommlet F, Nordborg M.

G3 (Bethesda). 2018 Aug 30;8(9):3059-3068. doi: 10.1534/g3.118.200571.

7.

Corrigendum to "Settlement patterns of the coral Acropora millepora on sediment-laden surfaces" [Sci. Total Environ. 609 (2017) 277-288].

Ricardo GF, Jones RJ, Nordborg M, Negri AP.

Sci Total Environ. 2018 Nov 1;640-641:116. doi: 10.1016/j.scitotenv.2018.05.219. Epub 2018 May 30. No abstract available.

PMID:
29859428
8.

Phototoxic effects of PAH and UVA exposure on molecular responses and developmental success in coral larvae.

Overmans S, Nordborg M, Díaz-Rúa R, Brinkman DL, Negri AP, Agustí S.

Aquat Toxicol. 2018 May;198:165-174. doi: 10.1016/j.aquatox.2018.03.008. Epub 2018 Mar 9.

9.

The maternal environment interacts with genetic variation in regulating seed dormancy in Swedish Arabidopsis thaliana.

Kerdaffrec E, Nordborg M.

PLoS One. 2017 Dec 27;12(12):e0190242. doi: 10.1371/journal.pone.0190242. eCollection 2017.

10.

Verification of Arabidopsis stock collections using SNPmatch, a tool for genotyping high-plexed samples.

Pisupati R, Reichardt I, Seren Ü, Korte P, Nizhynska V, Kerdaffrec E, Uzunova K, Rabanal FA, Filiault DL, Nordborg M.

Sci Data. 2017 Dec 19;4:170184. doi: 10.1038/sdata.2017.184.

11.

Ancient hybridization and strong adaptation to viruses across African vervet monkey populations.

Svardal H, Jasinska AJ, Apetrei C, Coppola G, Huang Y, Schmitt CA, Jacquelin B, Ramensky V, Müller-Trutwin M, Antonio M, Weinstock G, Grobler JP, Dewar K, Wilson RK, Turner TR, Warren WC, Freimer NB, Nordborg M.

Nat Genet. 2017 Dec;49(12):1705-1713. doi: 10.1038/ng.3980. Epub 2017 Oct 30. Erratum in: Nat Genet. 2018 Nov;50(11):1617.

12.

The AraGWAS Catalog: a curated and standardized Arabidopsis thaliana GWAS catalog.

Togninalli M, Seren Ü, Meng D, Fitz J, Nordborg M, Weigel D, Borgwardt K, Korte A, Grimm DG.

Nucleic Acids Res. 2018 Jan 4;46(D1):D1150-D1156. doi: 10.1093/nar/gkx954.

13.

Settlement patterns of the coral Acropora millepora on sediment-laden surfaces.

Ricardo GF, Jones RJ, Nordborg M, Negri AP.

Sci Total Environ. 2017 Dec 31;609:277-288. doi: 10.1016/j.scitotenv.2017.07.153. Epub 2017 Jul 24. Erratum in: Sci Total Environ. 2018 Nov 1;640-641:116.

14.

Epistatic and allelic interactions control expression of ribosomal RNA gene clusters in Arabidopsis thaliana.

Rabanal FA, Mandáková T, Soto-Jiménez LM, Greenhalgh R, Parrott DL, Lutzmayer S, Steffen JG, Nizhynska V, Mott R, Lysak MA, Clark RM, Nordborg M.

Genome Biol. 2017 May 3;18(1):75. doi: 10.1186/s13059-017-1209-z.

15.

Patterns of Polymorphism at the Self-Incompatibility Locus in 1,083 Arabidopsis thaliana Genomes.

Tsuchimatsu T, Goubet PM, Gallina S, Holl AC, Fobis-Loisy I, Bergès H, Marande W, Prat E, Meng D, Long Q, Platzer A, Nordborg M, Vekemans X, Castric V.

Mol Biol Evol. 2017 Aug 1;34(8):1878-1889. doi: 10.1093/molbev/msx122.

16.

Bioenergy production and sustainable development: science base for policymaking remains limited.

Robledo-Abad C, Althaus HJ, Berndes G, Bolwig S, Corbera E, Creutzig F, Garcia-Ulloa J, Geddes A, Gregg JS, Haberl H, Hanger S, Harper RJ, Hunsberger C, Larsen RK, Lauk C, Leitner S, Lilliestam J, Lotze-Campen H, Muys B, Nordborg M, Ölund M, Orlowsky B, Popp A, Portugal-Pereira J, Reinhard J, Scheiffle L, Smith P.

Glob Change Biol Bioenergy. 2017 Mar;9(3):541-556. doi: 10.1111/gcbb.12338. Epub 2016 Mar 23. Review.

17.

Unstable Inheritance of 45S rRNA Genes in Arabidopsis thaliana.

Rabanal FA, Nizhynska V, Mandáková T, Novikova PY, Lysak MA, Mott R, Nordborg M.

G3 (Bethesda). 2017 Apr 3;7(4):1201-1209. doi: 10.1534/g3.117.040204.

18.

On the post-glacial spread of human commensal Arabidopsis thaliana.

Lee CR, Svardal H, Farlow A, Exposito-Alonso M, Ding W, Novikova P, Alonso-Blanco C, Weigel D, Nordborg M.

Nat Commun. 2017 Feb 9;8:14458. doi: 10.1038/ncomms14458.

19.

Genomic Rearrangements in Arabidopsis Considered as Quantitative Traits.

Imprialou M, Kahles A, Steffen JG, Osborne EJ, Gan X, Lempe J, Bhomra A, Belfield E, Visscher A, Greenhalgh R, Harberd NP, Goram R, Hein J, Robert-Seilaniantz A, Jones J, Stegle O, Kover P, Tsiantis M, Nordborg M, Rätsch G, Clark RM, Mott R.

Genetics. 2017 Apr;205(4):1425-1441. doi: 10.1534/genetics.116.192823. Epub 2017 Feb 7.

20.

Genome Sequencing Reveals the Origin of the Allotetraploid Arabidopsis suecica.

Novikova PY, Tsuchimatsu T, Simon S, Nizhynska V, Voronin V, Burns R, Fedorenko OM, Holm S, Säll T, Prat E, Marande W, Castric V, Nordborg M.

Mol Biol Evol. 2017 Apr 1;34(4):957-968. doi: 10.1093/molbev/msw299.

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