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Items: 20

1.

Clustering of 770,000 genomes reveals post-colonial population structure of North America.

Han E, Carbonetto P, Curtis RE, Wang Y, Granka JM, Byrnes J, Noto K, Kermany AR, Myres NM, Barber MJ, Rand KA, Song S, Roman T, Battat E, Elyashiv E, Guturu H, Hong EL, Chahine KG, Ball CA.

Nat Commun. 2017 Feb 7;8:14238. doi: 10.1038/ncomms14238.

2.

Regional Differences in the Accumulation of SNPs on the Male-Specific Portion of the Human Y Chromosome Replicate Autosomal Patterns: Implications for Genetic Dating.

Trombetta B, D'Atanasio E, Massaia A, Myres NM, Scozzari R, Cruciani F, Novelletto A.

PLoS One. 2015 Jul 30;10(7):e0134646. doi: 10.1371/journal.pone.0134646. eCollection 2015.

3.

The phylogenetic and geographic structure of Y-chromosome haplogroup R1a.

Underhill PA, Poznik GD, Rootsi S, Järve M, Lin AA, Wang J, Passarelli B, Kanbar J, Myres NM, King RJ, Di Cristofaro J, Sahakyan H, Behar DM, Kushniarevich A, Sarac J, Saric T, Rudan P, Pathak AK, Chaubey G, Grugni V, Semino O, Yepiskoposyan L, Bahmanimehr A, Farjadian S, Balanovsky O, Khusnutdinova EK, Herrera RJ, Chiaroni J, Bustamante CD, Quake SR, Kivisild T, Villems R.

Eur J Hum Genet. 2015 Jan;23(1):124-31. doi: 10.1038/ejhg.2014.50. Epub 2014 Mar 26.

4.

An unbiased resource of novel SNP markers provides a new chronology for the human Y chromosome and reveals a deep phylogenetic structure in Africa.

Scozzari R, Massaia A, Trombetta B, Bellusci G, Myres NM, Novelletto A, Cruciani F.

Genome Res. 2014 Mar;24(3):535-44. doi: 10.1101/gr.160788.113. Epub 2014 Jan 6.

5.

Phylogenetic applications of whole Y-chromosome sequences and the Near Eastern origin of Ashkenazi Levites.

Rootsi S, Behar DM, Järve M, Lin AA, Myres NM, Passarelli B, Poznik GD, Tzur S, Sahakyan H, Pathak AK, Rosset S, Metspalu M, Grugni V, Semino O, Metspalu E, Bustamante CD, Skorecki K, Villems R, Kivisild T, Underhill PA.

Nat Commun. 2013;4:2928. doi: 10.1038/ncomms3928.

6.

Afghan Hindu Kush: where Eurasian sub-continent gene flows converge.

Di Cristofaro J, Pennarun E, Mazières S, Myres NM, Lin AA, Temori SA, Metspalu M, Metspalu E, Witzel M, King RJ, Underhill PA, Villems R, Chiaroni J.

PLoS One. 2013 Oct 18;8(10):e76748. doi: 10.1371/journal.pone.0076748. eCollection 2013.

7.

Molecular dissection of the basal clades in the human Y chromosome phylogenetic tree.

Scozzari R, Massaia A, D'Atanasio E, Myres NM, Perego UA, Trombetta B, Cruciani F.

PLoS One. 2012;7(11):e49170. doi: 10.1371/journal.pone.0049170. Epub 2012 Nov 7.

8.

Distinguishing the co-ancestries of haplogroup G Y-chromosomes in the populations of Europe and the Caucasus.

Rootsi S, Myres NM, Lin AA, Järve M, King RJ, Kutuev I, Cabrera VM, Khusnutdinova EK, Varendi K, Sahakyan H, Behar DM, Khusainova R, Balanovsky O, Balanovska E, Rudan P, Yepiskoposyan L, Bahmanimehr A, Farjadian S, Kushniarevich A, Herrera RJ, Grugni V, Battaglia V, Nici C, Crobu F, Karachanak S, Hooshiar Kashani B, Houshmand M, Sanati MH, Toncheva D, Lisa A, Semino O, Chiaroni J, Di Cristofaro J, Villems R, Kivisild T, Underhill PA.

Eur J Hum Genet. 2012 Dec;20(12):1275-82. doi: 10.1038/ejhg.2012.86. Epub 2012 May 16.

9.

New insights into the Tyrolean Iceman's origin and phenotype as inferred by whole-genome sequencing.

Keller A, Graefen A, Ball M, Matzas M, Boisguerin V, Maixner F, Leidinger P, Backes C, Khairat R, Forster M, Stade B, Franke A, Mayer J, Spangler J, McLaughlin S, Shah M, Lee C, Harkins TT, Sartori A, Moreno-Estrada A, Henn B, Sikora M, Semino O, Chiaroni J, Rootsi S, Myres NM, Cabrera VM, Underhill PA, Bustamante CD, Vigl EE, Samadelli M, Cipollini G, Haas J, Katus H, O'Connor BD, Carlson MR, Meder B, Blin N, Meese E, Pusch CM, Zink A.

Nat Commun. 2012 Feb 28;3:698. doi: 10.1038/ncomms1701.

PMID:
22426219
10.

The coming of the Greeks to Provence and Corsica: Y-chromosome models of archaic Greek colonization of the western Mediterranean.

King RJ, Di Cristofaro J, Kouvatsi A, Triantaphyllidis C, Scheidel W, Myres NM, Lin AA, Eissautier A, Mitchell M, Binder D, Semino O, Novelletto A, Underhill PA, Chiaroni J.

BMC Evol Biol. 2011 Mar 14;11:69. doi: 10.1186/1471-2148-11-69.

11.

A major Y-chromosome haplogroup R1b Holocene era founder effect in Central and Western Europe.

Myres NM, Rootsi S, Lin AA, Järve M, King RJ, Kutuev I, Cabrera VM, Khusnutdinova EK, Pshenichnov A, Yunusbayev B, Balanovsky O, Balanovska E, Rudan P, Baldovic M, Herrera RJ, Chiaroni J, Di Cristofaro J, Villems R, Kivisild T, Underhill PA.

Eur J Hum Genet. 2011 Jan;19(1):95-101. doi: 10.1038/ejhg.2010.146. Epub 2010 Aug 25.

12.

Expression of cyclooxygenase isoforms in the baculovirus expression system.

Hunter JC, Myres NM, Simmons DL.

Methods Mol Biol. 2010;644:45-54. doi: 10.1007/978-1-59745-364-6_5.

PMID:
20645164
13.

The initial peopling of the Americas: a growing number of founding mitochondrial genomes from Beringia.

Perego UA, Angerhofer N, Pala M, Olivieri A, Lancioni H, Hooshiar Kashani B, Carossa V, Ekins JE, Gómez-Carballa A, Huber G, Zimmermann B, Corach D, Babudri N, Panara F, Myres NM, Parson W, Semino O, Salas A, Woodward SR, Achilli A, Torroni A.

Genome Res. 2010 Sep;20(9):1174-9. doi: 10.1101/gr.109231.110. Epub 2010 Jun 29.

14.

Separating the post-Glacial coancestry of European and Asian Y chromosomes within haplogroup R1a.

Underhill PA, Myres NM, Rootsi S, Metspalu M, Zhivotovsky LA, King RJ, Lin AA, Chow CE, Semino O, Battaglia V, Kutuev I, Järve M, Chaubey G, Ayub Q, Mohyuddin A, Mehdi SQ, Sengupta S, Rogaev EI, Khusnutdinova EK, Pshenichnov A, Balanovsky O, Balanovska E, Jeran N, Augustin DH, Baldovic M, Herrera RJ, Thangaraj K, Singh V, Singh L, Majumder P, Rudan P, Primorac D, Villems R, Kivisild T.

Eur J Hum Genet. 2010 Apr;18(4):479-84. doi: 10.1038/ejhg.2009.194. Epub 2009 Nov 4. Erratum in: Eur J Hum Genet. 2010 Sep;18(9):1074.

15.

The emergence of Y-chromosome haplogroup J1e among Arabic-speaking populations.

Chiaroni J, King RJ, Myres NM, Henn BM, Ducourneau A, Mitchell MJ, Boetsch G, Sheikha I, Lin AA, Nik-Ahd M, Ahmad J, Lattanzi F, Herrera RJ, Ibrahim ME, Brody A, Semino O, Kivisild T, Underhill PA.

Eur J Hum Genet. 2010 Mar;18(3):348-53. doi: 10.1038/ejhg.2009.166. Epub 2009 Oct 14.

16.
17.

Distinctive Paleo-Indian migration routes from Beringia marked by two rare mtDNA haplogroups.

Perego UA, Achilli A, Angerhofer N, Accetturo M, Pala M, Olivieri A, Hooshiar Kashani B, Ritchie KH, Scozzari R, Kong QP, Myres NM, Salas A, Semino O, Bandelt HJ, Woodward SR, Torroni A.

Curr Biol. 2009 Jan 13;19(1):1-8. doi: 10.1016/j.cub.2008.11.058.

18.

Y-chromosomal evidence of the cultural diffusion of agriculture in Southeast Europe.

Battaglia V, Fornarino S, Al-Zahery N, Olivieri A, Pala M, Myres NM, King RJ, Rootsi S, Marjanovic D, Primorac D, Hadziselimovic R, Vidovic S, Drobnic K, Durmishi N, Torroni A, Santachiara-Benerecetti AS, Underhill PA, Semino O.

Eur J Hum Genet. 2009 Jun;17(6):820-30. doi: 10.1038/ejhg.2008.249. Epub 2008 Dec 24. Erratum in: Eur J Hum Genet. 2009 Jun;17(6):853.

19.

Y-chromosome short tandem repeat DYS458.2 non-consensus alleles occur independently in both binary haplogroups J1-M267 and R1b3-M405.

Myres NM, Ekins JE, Lin AA, Cavalli-Sforza LL, Woodward SR, Underhill PA.

Croat Med J. 2007 Aug;48(4):450-9.

20.

Inference of ancestry: constructing hierarchical reference populations and assigning unknown individuals.

Ekins JE, Ekins JB, Layton L, Hutchison LA, Myres NM, Woodward SR.

Hum Genomics. 2006 Jan;2(4):212-35.

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