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Items: 1 to 20 of 37


Complete Genome Sequence of the Model Halovirus PhiH1 (ΦH1).

Dyall-Smith M, Pfeifer F, Witte A, Oesterhelt D, Pfeiffer F.

Genes (Basel). 2018 Oct 12;9(10). pii: E493. doi: 10.3390/genes9100493.


Evaluation of the genomic diversity of viruses infecting bacteria, archaea and eukaryotes using a common bioinformatic platform: steps towards a unified taxonomy.

Aiewsakun P, Adriaenssens EM, Lavigne R, Kropinski AM, Simmonds P.

J Gen Virol. 2018 Sep;99(9):1331-1343. doi: 10.1099/jgv.0.001110. Epub 2018 Jul 17.


Variable termination sites of DNA polymerases encountering a DNA-protein cross-link.

Yudkina AV, Dvornikova AP, Zharkov DO.

PLoS One. 2018 Jun 1;13(6):e0198480. doi: 10.1371/journal.pone.0198480. eCollection 2018.


Ecological dynamics and co-occurrence among marine phytoplankton, bacteria and myoviruses shows microdiversity matters.

Needham DM, Sachdeva R, Fuhrman JA.

ISME J. 2017 Jul;11(7):1614-1629. doi: 10.1038/ismej.2017.29. Epub 2017 Apr 11.


Microbial diversity of a full-scale UASB reactor applied to poultry slaughterhouse wastewater treatment: integration of 16S rRNA gene amplicon and shotgun metagenomic sequencing.

Delforno TP, Lacerda Júnior GV, Noronha MF, Sakamoto IK, Varesche MBA, Oliveira VM.

Microbiologyopen. 2017 Jun;6(3). doi: 10.1002/mbo3.443. Epub 2017 Feb 23.


The Viral Gene ORF79 Encodes a Repressor Regulating Induction of the Lytic Life Cycle in the Haloalkaliphilic Virus ϕCh1.

Selb R, Derntl C, Klein R, Alte B, Hofbauer C, Kaufmann M, Beraha J, Schöner L, Witte A.

J Virol. 2017 Apr 13;91(9). pii: e00206-17. doi: 10.1128/JVI.00206-17. Print 2017 May 1.


Optimizing protocols for extraction of bacteriophages prior to metagenomic analyses of phage communities in the human gut.

Castro-Mejía JL, Muhammed MK, Kot W, Neve H, Franz CM, Hansen LH, Vogensen FK, Nielsen DS.

Microbiome. 2015 Nov 17;3:64. doi: 10.1186/s40168-015-0131-4.


Viruses of haloarchaea.

Luk AW, Williams TJ, Erdmann S, Papke RT, Cavicchioli R.

Life (Basel). 2014 Nov 13;4(4):681-715. doi: 10.3390/life4040681. Review.


Conformational analysis of processivity clamps in solution demonstrates that tertiary structure does not correlate with protein dynamics.

Fang J, Nevin P, Kairys V, Venclovas Č, Engen JR, Beuning PJ.

Structure. 2014 Apr 8;22(4):572-581. doi: 10.1016/j.str.2014.02.001. Epub 2014 Mar 6.


Structures and host-adhesion mechanisms of lactococcal siphophages.

Spinelli S, Veesler D, Bebeacua C, Cambillau C.

Front Microbiol. 2014 Jan 16;5:3. doi: 10.3389/fmicb.2014.00003. eCollection 2014. Review.


Characterization of persistent virus-like particles in two acetate-fed methanogenic reactors.

Chien IC, Meschke JS, Gough HL, Ferguson JF.

PLoS One. 2013 Nov 22;8(11):e81040. doi: 10.1371/journal.pone.0081040. eCollection 2013.


Replication clamps and clamp loaders.

Hedglin M, Kumar R, Benkovic SJ.

Cold Spring Harb Perspect Biol. 2013 Apr 1;5(4):a010165. doi: 10.1101/cshperspect.a010165. Review.


Utilization of virus φCh1 elements to establish a shuttle vector system for Halo(alkali)philic Archaea via transformation of Natrialba magadii.

Mayrhofer-Iro M, Ladurner A, Meissner C, Derntl C, Reiter M, Haider F, Dimmel K, Rössler N, Klein R, Baranyi U, Scholz H, Witte A.

Appl Environ Microbiol. 2013 Apr;79(8):2741-8. doi: 10.1128/AEM.03287-12. Epub 2013 Feb 15.


Haloarchaeal myovirus φCh1 harbours a phase variation system for the production of protein variants with distinct cell surface adhesion specificities.

Klein R, Rössler N, Iro M, Scholz H, Witte A.

Mol Microbiol. 2012 Jan;83(1):137-50. doi: 10.1111/j.1365-2958.2011.07921.x. Epub 2011 Nov 29.


Functional evaluation of bacteriophage T4 Rad50 signature motif residues.

Herdendorf TJ, Nelson SW.

Biochemistry. 2011 Jul 12;50(27):6030-40. doi: 10.1021/bi200184w. Epub 2011 Jun 15.


Heterologous expression and purification of membrane-bound pyrophosphatases.

Kellosalo J, Kajander T, Palmgren MG, Lopéz-Marqués RL, Goldman A.

Protein Expr Purif. 2011 Sep;79(1):25-34. doi: 10.1016/j.pep.2011.05.020. Epub 2011 Jun 2.


Dissipation of proton motive force is not sufficient to induce the phage shock protein response in Escherichia coli.

Engl C, Beek AT, Bekker M, de Mattos JT, Jovanovic G, Buck M.

Curr Microbiol. 2011 May;62(5):1374-85. doi: 10.1007/s00284-011-9869-5. Epub 2011 Jan 23.


LCP-Tm: an assay to measure and understand stability of membrane proteins in a membrane environment.

Liu W, Hanson MA, Stevens RC, Cherezov V.

Biophys J. 2010 Apr 21;98(8):1539-48. doi: 10.1016/j.bpj.2009.12.4296.


Structure of lactococcal phage p2 baseplate and its mechanism of activation.

Sciara G, Bebeacua C, Bron P, Tremblay D, Ortiz-Lombardia M, Lichière J, van Heel M, Campanacci V, Moineau S, Cambillau C.

Proc Natl Acad Sci U S A. 2010 Apr 13;107(15):6852-7. doi: 10.1073/pnas.1000232107. Epub 2010 Mar 29.


The structure of an archaeal homodimeric ligase which has RNA circularization activity.

Brooks MA, Meslet-Cladiére L, Graille M, Kuhn J, Blondeau K, Myllykallio H, van Tilbeurgh H.

Protein Sci. 2008 Aug;17(8):1336-45. doi: 10.1110/ps.035493.108. Epub 2008 May 29.

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