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Items: 1 to 20 of 64

1.

Evolutionary Dynamics in the RNA Bacteriophage Qβ Depends on the Pattern of Change in Selective Pressures.

Somovilla P, Manrubia S, Lázaro E.

Pathogens. 2019 Jun 18;8(2). pii: E80. doi: 10.3390/pathogens8020080.

2.

Parsimonious Scenario for the Emergence of Viroid-Like Replicons De Novo.

Catalán P, Elena SF, Cuesta JA, Manrubia S.

Viruses. 2019 May 9;11(5). pii: E425. doi: 10.3390/v11050425.

3.

Endemicity and prevalence of multipartite viruses under heterogeneous between-host transmission.

Valdano E, Manrubia S, Gómez S, Arenas A.

PLoS Comput Biol. 2019 Mar 18;15(3):e1006876. doi: 10.1371/journal.pcbi.1006876. eCollection 2019 Mar.

4.

Limited role of spatial self-structuring in emergent trade-offs during pathogen evolution.

Buendía V, Muñoz MA, Manrubia S.

Sci Rep. 2018 Aug 20;8(1):12476. doi: 10.1038/s41598-018-30945-1.

5.

Theoretical approaches to disclosing the emergence and adaptive advantages of multipartite viruses.

Lucía-Sanz A, Aguirre J, Manrubia S.

Curr Opin Virol. 2018 Dec;33:89-95. doi: 10.1016/j.coviro.2018.07.018. Epub 2018 Aug 16. Review.

PMID:
30121469
6.

On the networked architecture of genotype spaces and its critical effects on molecular evolution.

Aguirre J, Catalán P, Cuesta JA, Manrubia S.

Open Biol. 2018 Jul;8(7). pii: 180069. doi: 10.1098/rsob.180069. Review.

7.

Author Correction: The space of genotypes is a network of networks: implications for evolutionary and extinction dynamics.

Yubero P, Manrubia S, Aguirre J.

Sci Rep. 2018 May 3;8(1):7291. doi: 10.1038/s41598-018-25218-w.

8.

Differences in adaptive dynamics determine the success of virus variants that propagate together.

Arribas M, Aguirre J, Manrubia S, Lázaro E.

Virus Evol. 2018 Jan 9;4(1):vex043. doi: 10.1093/ve/vex043. eCollection 2018 Jan.

9.

Adding levels of complexity enhances robustness and evolvability in a multilevel genotype-phenotype map.

Catalán P, Wagner A, Manrubia S, Cuesta JA.

J R Soc Interface. 2018 Jan;15(138). pii: 20170516. doi: 10.1098/rsif.2017.0516.

10.

Multipartite viruses: adaptive trick or evolutionary treat?

Lucía-Sanz A, Manrubia S.

NPJ Syst Biol Appl. 2017 Nov 9;3:34. doi: 10.1038/s41540-017-0035-y. eCollection 2017. Review.

11.

The space of genotypes is a network of networks: implications for evolutionary and extinction dynamics.

Yubero P, Manrubia S, Aguirre J.

Sci Rep. 2017 Oct 23;7(1):13813. doi: 10.1038/s41598-017-14048-x. Erratum in: Sci Rep. 2018 May 3;8(1):7291.

12.

Disentangling the effects of selection and loss bias on gene dynamics.

Iranzo J, Cuesta JA, Manrubia S, Katsnelson MI, Koonin EV.

Proc Natl Acad Sci U S A. 2017 Jul 11;114(28):E5616-E5624. doi: 10.1073/pnas.1704925114. Epub 2017 Jun 26.

13.

Distribution of genotype network sizes in sequence-to-structure genotype-phenotype maps.

Manrubia S, Cuesta JA.

J R Soc Interface. 2017 Apr;14(129). pii: 20160976. doi: 10.1098/rsif.2016.0976.

14.

Internal Disequilibria and Phenotypic Diversification during Replication of Hepatitis C Virus in a Noncoevolving Cellular Environment.

Moreno E, Gallego I, Gregori J, Lucía-Sanz A, Soria ME, Castro V, Beach NM, Manrubia S, Quer J, Esteban JI, Rice CM, Gómez J, Gastaminza P, Domingo E, Perales C.

J Virol. 2017 Apr 28;91(10). pii: e02505-16. doi: 10.1128/JVI.02505-16. Print 2017 May 15.

15.

Adaptive multiscapes: an up-to-date metaphor to visualize molecular adaptation.

Catalán P, Arias CF, Cuesta JA, Manrubia S.

Biol Direct. 2017 Feb 28;12(1):7. doi: 10.1186/s13062-017-0178-1.

16.

Enumerating secondary structures and structural moieties for circular RNAs.

Cuesta JA, Manrubia S.

J Theor Biol. 2017 Apr 21;419:375-382. doi: 10.1016/j.jtbi.2017.02.024. Epub 2017 Feb 21.

PMID:
28232123
17.

The vast unknown microbial biosphere.

Pedrós-Alió C, Manrubia S.

Proc Natl Acad Sci U S A. 2016 Jun 14;113(24):6585-7. doi: 10.1073/pnas.1606105113. Epub 2016 Jun 2. No abstract available.

18.

Demography-based adaptive network model reproduces the spatial organization of human linguistic groups.

Capitán JA, Manrubia S.

Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Dec;92(6):062811. doi: 10.1103/PhysRevE.92.062811. Epub 2015 Dec 9.

PMID:
26764748
19.

Getting to Know Viral Evolutionary Strategies: Towards the Next Generation of Quasispecies Models.

Manrubia S, Lázaro E.

Curr Top Microbiol Immunol. 2016;392:201-17. doi: 10.1007/82_2015_457. Review.

PMID:
26271604
20.

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