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Items: 19

1.

Overcoming a nucleosomal barrier to replication.

Chang HW, Pandey M, Kulaeva OI, Patel SS, Studitsky VM.

Sci Adv. 2016 Nov 11;2(11):e1601865. eCollection 2016 Nov.

2.

T7 replisome directly overcomes DNA damage.

Sun B, Pandey M, Inman JT, Yang Y, Kashlev M, Patel SS, Wang MD.

Nat Commun. 2015 Dec 17;6:10260. doi: 10.1038/ncomms10260.

3.

Two mechanisms coordinate replication termination by the Escherichia coli Tus-Ter complex.

Pandey M, Elshenawy MM, Jergic S, Takahashi M, Dixon NE, Hamdan SM, Patel SS.

Nucleic Acids Res. 2015 Jul 13;43(12):5924-35. doi: 10.1093/nar/gkv527. Epub 2015 May 24.

4.

Cooperative base pair melting by helicase and polymerase positioned one nucleotide from each other.

Nandakumar D, Pandey M, Patel SS.

Elife. 2015 May 13;4. doi: 10.7554/eLife.06562.

5.

Interaction of kindlin-2 with integrin β3 promotes outside-in signaling responses by the αVβ3 vitronectin receptor.

Liao Z, Kato H, Pandey M, Cantor JM, Ablooglu AJ, Ginsberg MH, Shattil SJ.

Blood. 2015 Mar 19;125(12):1995-2004. doi: 10.1182/blood-2014-09-603035. Epub 2015 Jan 13.

6.

Helicase and polymerase move together close to the fork junction and copy DNA in one-nucleotide steps.

Pandey M, Patel SS.

Cell Rep. 2014 Mar 27;6(6):1129-1138. doi: 10.1016/j.celrep.2014.02.025. Epub 2014 Mar 13.

7.

Single-molecule fluorescence reveals the unwinding stepping mechanism of replicative helicase.

Syed S, Pandey M, Patel SS, Ha T.

Cell Rep. 2014 Mar 27;6(6):1037-1045. doi: 10.1016/j.celrep.2014.02.022. Epub 2014 Mar 13.

8.

Yeast Pif1 helicase exhibits a one-base-pair stepping mechanism for unwinding duplex DNA.

Ramanagoudr-Bhojappa R, Chib S, Byrd AK, Aarattuthodiyil S, Pandey M, Patel SS, Raney KD.

J Biol Chem. 2013 May 31;288(22):16185-95. doi: 10.1074/jbc.M113.470013. Epub 2013 Apr 17.

9.

ATP-induced helicase slippage reveals highly coordinated subunits.

Sun B, Johnson DS, Patel G, Smith BY, Pandey M, Patel SS, Wang MD.

Nature. 2011 Sep 18;478(7367):132-5. doi: 10.1038/nature10409.

10.

Dynamic coupling between the motors of DNA replication: hexameric helicase, DNA polymerase, and primase.

Patel SS, Pandey M, Nandakumar D.

Curr Opin Chem Biol. 2011 Oct;15(5):595-605. doi: 10.1016/j.cbpa.2011.08.003. Epub 2011 Aug 22. Review.

11.

A257T linker region mutant of T7 helicase-primase protein is defective in DNA loading and rescued by T7 DNA polymerase.

Patel G, Johnson DS, Sun B, Pandey M, Yu X, Egelman EH, Wang MD, Patel SS.

J Biol Chem. 2011 Jun 10;286(23):20490-9. doi: 10.1074/jbc.M110.201657. Epub 2011 Apr 22.

12.

Experimental and computational analysis of DNA unwinding and polymerization kinetics.

Pandey M, Levin MK, Patel SS.

Methods Mol Biol. 2010;587:57-83. doi: 10.1007/978-1-60327-355-8_5.

13.

Coordinating DNA replication by means of priming loop and differential synthesis rate.

Pandey M, Syed S, Donmez I, Patel G, Ha T, Patel SS.

Nature. 2009 Dec 17;462(7275):940-3. doi: 10.1038/nature08611. Epub 2009 Nov 18.

14.

Mechanisms and consequences of agonist-induced talin recruitment to platelet integrin alphaIIbbeta3.

Watanabe N, Bodin L, Pandey M, Krause M, Coughlin S, Boussiotis VA, Ginsberg MH, Shattil SJ.

J Cell Biol. 2008 Jun 30;181(7):1211-22. doi: 10.1083/jcb.200803094. Epub 2008 Jun 23.

15.

Kinetic pathway of pyrophosphorolysis by a retrotransposon reverse transcriptase.

Pandey M, Patel SS, Gabriel A.

PLoS One. 2008 Jan 2;3(1):e1389. doi: 10.1371/journal.pone.0001389.

17.

Molecular mechanisms of tumor necrosis factor-alpha-mediated plasminogen activator inhibitor-1 expression in adipocytes.

Pandey M, Loskutoff DJ, Samad F.

FASEB J. 2005 Aug;19(10):1317-9. Epub 2005 May 31.

PMID:
15928193
18.

Insights into the role of an active site aspartate in Ty1 reverse transcriptase polymerization.

Pandey M, Patel S, Gabriel A.

J Biol Chem. 2004 Nov 12;279(46):47840-8. Epub 2004 Aug 28.

19.

Divergent roles for p55 and p75 TNF-alpha receptors in the induction of plasminogen activator inhibitor-1.

Pandey M, Tuncman G, Hotamisligil GS, Samad F.

Am J Pathol. 2003 Mar;162(3):933-41.

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