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Items: 7

1.

Freiburg RNA tools: a central online resource for RNA-focused research and teaching.

Raden M, Ali SM, Alkhnbashi OS, Busch A, Costa F, Davis JA, Eggenhofer F, Gelhausen R, Georg J, Heyne S, Hiller M, Kundu K, Kleinkauf R, Lott SC, Mohamed MM, Mattheis A, Miladi M, Richter AS, Will S, Wolff J, Wright PR, Backofen R.

Nucleic Acids Res. 2018 Jul 2;46(W1):W25-W29. doi: 10.1093/nar/gky329.

2.

GLASSgo - Automated and Reliable Detection of sRNA Homologs From a Single Input Sequence.

Lott SC, Schäfer RA, Mann M, Backofen R, Hess WR, Voß B, Georg J.

Front Genet. 2018 Apr 17;9:124. doi: 10.3389/fgene.2018.00124. eCollection 2018.

3.

Identification of the DNA methyltransferases establishing the methylome of the cyanobacterium Synechocystis sp. PCC 6803.

Hagemann M, Gärtner K, Scharnagl M, Bolay P, Lott SC, Fuss J, Huettel B, Reinhardt R, Klähn S, Hess WR.

DNA Res. 2018 Aug 1;25(4):343-352. doi: 10.1093/dnares/dsy006.

4.

Customized workflow development and data modularization concepts for RNA-Sequencing and metatranscriptome experiments.

Lott SC, Wolfien M, Riege K, Bagnacani A, Wolkenhauer O, Hoffmann S, Hess WR.

J Biotechnol. 2017 Nov 10;261:85-96. doi: 10.1016/j.jbiotec.2017.06.1203. Epub 2017 Jul 1. Review.

5.

The RNA workbench: best practices for RNA and high-throughput sequencing bioinformatics in Galaxy.

Grüning BA, Fallmann J, Yusuf D, Will S, Erxleben A, Eggenhofer F, Houwaart T, Batut B, Videm P, Bagnacani A, Wolfien M, Lott SC, Hoogstrate Y, Hess WR, Wolkenhauer O, Hoffmann S, Akalin A, Ohler U, Stadler PF, Backofen R.

Nucleic Acids Res. 2017 Jul 3;45(W1):W560-W566. doi: 10.1093/nar/gkx409.

6.

CoVennTree: a new method for the comparative analysis of large datasets.

Lott SC, Voß B, Hess WR, Steglich C.

Front Genet. 2015 Feb 20;6:43. doi: 10.3389/fgene.2015.00043. eCollection 2015.

7.

Dataset for metatranscriptome analysis of Prochlorococcus-rich marine picoplankton communities in the Gulf of Aqaba, Red Sea.

Steglich C, Stazic D, Lott SC, Voigt K, Greengrass E, Lindell D, Hess WR.

Mar Genomics. 2015 Feb;19:5-7. doi: 10.1016/j.margen.2014.10.009. Epub 2014 Nov 4.

PMID:
25450165

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