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Items: 20

1.

Differential regulation of RNA polymerase III genes during liver regeneration.

Yeganeh M, Praz V, Carmeli C, Villeneuve D, Rib L, Guex N, Herr W, Delorenzi M, Hernandez N; CycliX consortium .

Nucleic Acids Res. 2018 Dec 29. doi: 10.1093/nar/gky1282. [Epub ahead of print]

PMID:
30597109
2.

The conserved threonine-rich region of the HCF-1PRO repeat activates promiscuous OGT:UDP-GlcNAc glycosylation and proteolysis activities.

Kapuria V, Röhrig UF, Waridel P, Lammers F, Borodkin VS, van Aalten DMF, Zoete V, Herr W.

J Biol Chem. 2018 Nov 16;293(46):17754-17768. doi: 10.1074/jbc.RA118.004185. Epub 2018 Sep 17.

3.

Cycles of gene expression and genome response during mammalian tissue regeneration.

Rib L, Villeneuve D, Minocha S, Praz V, Hernandez N, Guex N, Herr W; CycliX Consortium.

Epigenetics Chromatin. 2018 Sep 12;11(1):52. doi: 10.1186/s13072-018-0222-0.

4.

Size matters: Grey matter brain reserve predicts executive functioning in the elderly.

Laubach M, Lammers F, Zacharias N, Feinkohl I, Pischon T, Borchers F, Slooter AJC, Kühn S, Spies C, Winterer G; BioCog Consortium.

Neuropsychologia. 2018 Oct;119:172-181. doi: 10.1016/j.neuropsychologia.2018.08.008. Epub 2018 Aug 10.

5.

Basal forebrain cholinergic system volume is associated with general cognitive ability in the elderly.

Lammers F, Borchers F, Feinkohl I, Hendrikse J, Kant IMJ, Kozma P, Pischon T, Slooter AJC, Spies C, van Montfort SJT, Zacharias N, Zaborszky L, Winterer G; BioCog consortium.

Neuropsychologia. 2018 Oct;119:145-156. doi: 10.1016/j.neuropsychologia.2018.08.005. Epub 2018 Aug 7.

6.

Whole-genome sequencing of the blue whale and other rorquals finds signatures for introgressive gene flow.

Árnason Ú, Lammers F, Kumar V, Nilsson MA, Janke A.

Sci Adv. 2018 Apr 4;4(4):eaap9873. doi: 10.1126/sciadv.aap9873. eCollection 2018 Apr.

7.

Phylogenetic Conflict in Bears Identified by Automated Discovery of Transposable Element Insertions in Low-Coverage Genomes.

Lammers F, Gallus S, Janke A, Nilsson MA.

Genome Biol Evol. 2017 Oct 1;9(10):2862-2878. doi: 10.1093/gbe/evx170.

8.

The evolutionary history of bears is characterized by gene flow across species.

Kumar V, Lammers F, Bidon T, Pfenninger M, Kolter L, Nilsson MA, Janke A.

Sci Rep. 2017 Apr 19;7:46487. doi: 10.1038/srep46487.

9.

Diurnal regulation of RNA polymerase III transcription is under the control of both the feeding-fasting response and the circadian clock.

Mange F, Praz V, Migliavacca E, Willis IM, Schütz F, Hernandez N; CycliX Consortium.

Genome Res. 2017 Jun;27(6):973-984. doi: 10.1101/gr.217521.116. Epub 2017 Mar 24.

10.

When Genomics Is Not Enough: Experimental Evidence for a Decrease in LINE-1 Activity During the Evolution of Australian Marsupials.

Gallus S, Lammers F, Nilsson MA.

Genome Biol Evol. 2016 Aug 25;8(8):2406-12. doi: 10.1093/gbe/evw159.

11.

Effects of Ncl. Basalis Meynert volume on the Trail-Making-Test are restricted to the left hemisphere.

Lammers F, Mobascher A, Musso F, Shah NJ, Warbrick T, Zaborszky L, Winterer G.

Brain Behav. 2015 Dec 29;6(1):e00421. doi: 10.1002/brb3.421. eCollection 2016 Jan.

12.

Compensatory embryonic response to allele-specific inactivation of the murine X-linked gene Hcfc1.

Minocha S, Sung TL, Villeneuve D, Lammers F, Herr W.

Dev Biol. 2016 Apr 1;412(1):1-17. doi: 10.1016/j.ydbio.2016.02.019. Epub 2016 Feb 24.

13.

Quantifying ChIP-seq data: a spiking method providing an internal reference for sample-to-sample normalization.

Bonhoure N, Bounova G, Bernasconi D, Praz V, Lammers F, Canella D, Willis IM, Herr W, Hernandez N, Delorenzi M; CycliX Consortium.

Genome Res. 2014 Jul;24(7):1157-68. doi: 10.1101/gr.168260.113. Epub 2014 Apr 7.

14.

Genome-wide analysis of SREBP1 activity around the clock reveals its combined dependency on nutrient and circadian signals.

Gilardi F, Migliavacca E, Naldi A, Baruchet M, Canella D, Le Martelot G, Guex N, Desvergne B; CycliX Consortium.

PLoS Genet. 2014 Mar 6;10(3):e1004155. doi: 10.1371/journal.pgen.1004155. eCollection 2014 Mar.

15.

Genome-wide RNA polymerase II profiles and RNA accumulation reveal kinetics of transcription and associated epigenetic changes during diurnal cycles.

Le Martelot G, Canella D, Symul L, Migliavacca E, Gilardi F, Liechti R, Martin O, Harshman K, Delorenzi M, Desvergne B, Herr W, Deplancke B, Schibler U, Rougemont J, Guex N, Hernandez N, Naef F; CycliX Consortium.

PLoS Biol. 2012;10(11):e1001442. doi: 10.1371/journal.pbio.1001442. Epub 2012 Nov 27.

16.

HCF-1 self-association via an interdigitated Fn3 structure facilitates transcriptional regulatory complex formation.

Park J, Lammers F, Herr W, Song JJ.

Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17430-5. doi: 10.1073/pnas.1208378109. Epub 2012 Oct 8.

17.

A multiplicity of factors contributes to selective RNA polymerase III occupancy of a subset of RNA polymerase III genes in mouse liver.

Canella D, Bernasconi D, Gilardi F, LeMartelot G, Migliavacca E, Praz V, Cousin P, Delorenzi M, Hernandez N; CycliX Consortium.

Genome Res. 2012 Apr;22(4):666-80. doi: 10.1101/gr.130286.111. Epub 2012 Jan 27.

18.

O-GlcNAc transferase catalyzes site-specific proteolysis of HCF-1.

Capotosti F, Guernier S, Lammers F, Waridel P, Cai Y, Jin J, Conaway JW, Conaway RC, Herr W.

Cell. 2011 Feb 4;144(3):376-88. doi: 10.1016/j.cell.2010.12.030.

19.

Thermal biosensors in biotechnology.

Lammers F, Scheper T.

Adv Biochem Eng Biotechnol. 1999;64:35-67. Review.

PMID:
9933975
20.

Fermentation monitoring and process control.

Scheper TH, Lammers F.

Curr Opin Biotechnol. 1994 Feb;5(2):187-91. Review.

PMID:
7764798

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