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Hierarchical scaffolding with Bambus.
Pop M, Kosack DS, Salzberg SL. Pop M, et al. Among authors: kosack ds. Genome Res. 2004 Jan;14(1):149-59. doi: 10.1101/gr.1536204. Genome Res. 2004. PMID: 14707177 Free PMC article.
Genome sequence and comparative analysis of the model rodent malaria parasite Plasmodium yoelii yoelii.
Carlton JM, Angiuoli SV, Suh BB, Kooij TW, Pertea M, Silva JC, Ermolaeva MD, Allen JE, Selengut JD, Koo HL, Peterson JD, Pop M, Kosack DS, Shumway MF, Bidwell SL, Shallom SJ, van Aken SE, Riedmuller SB, Feldblyum TV, Cho JK, Quackenbush J, Sedegah M, Shoaibi A, Cummings LM, Florens L, Yates JR, Raine JD, Sinden RE, Harris MA, Cunningham DA, Preiser PR, Bergman LW, Vaidya AB, van Lin LH, Janse CJ, Waters AP, Smith HO, White OR, Salzberg SL, Venter JC, Fraser CM, Hoffman SL, Gardner MJ, Carucci DJ. Carlton JM, et al. Among authors: kosack ds. Nature. 2002 Oct 3;419(6906):512-9. doi: 10.1038/nature01099. Nature. 2002. PMID: 12368865