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Items: 1 to 20 of 84

1.

Efficient enrichment cloning of TAL effector genes from Xanthomonas.

Tran TT, Doucouré H, Hutin M, Jaimes Niño LM, Szurek B, Cunnac S, Koebnik R.

MethodsX. 2018 Sep 4;5:1027-1032. doi: 10.1016/j.mex.2018.08.014. eCollection 2018.

2.

Functional and Genome Sequence-Driven Characterization of tal Effector Gene Repertoires Reveals Novel Variants With Altered Specificities in Closely Related Malian Xanthomonas oryzae pv. oryzae Strains.

Doucouré H, Pérez-Quintero AL, Reshetnyak G, Tekete C, Auguy F, Thomas E, Koebnik R, Szurek B, Koita O, Verdier V, Cunnac S.

Front Microbiol. 2018 Aug 6;9:1657. doi: 10.3389/fmicb.2018.01657. eCollection 2018.

3.

Horizontal gene transfer plays a major role in the pathological convergence of Xanthomonas lineages on common bean.

Chen NWG, Serres-Giardi L, Ruh M, Briand M, Bonneau S, Darrasse A, Barbe V, Gagnevin L, Koebnik R, Jacques MA.

BMC Genomics. 2018 Aug 13;19(1):606. doi: 10.1186/s12864-018-4975-4.

4.

Functional analysis of African Xanthomonas oryzae pv. oryzae TALomes reveals a new susceptibility gene in bacterial leaf blight of rice.

Tran TT, Pérez-Quintero AL, Wonni I, Carpenter SCD, Yu Y, Wang L, Leach JE, Verdier V, Cunnac S, Bogdanove AJ, Koebnik R, Hutin M, Szurek B.

PLoS Pathog. 2018 Jun 4;14(6):e1007092. doi: 10.1371/journal.ppat.1007092. eCollection 2018 Jun.

5.

Enterobacter cloacae, an Emerging Plant-Pathogenic Bacterium Affecting Chili Pepper Seedlings.

García-González T, Sáenz-Hidalgo HK, Silva-Rojas HV, Morales-Nieto C, Vancheva T, Koebnik R, Ávila-Quezada GD.

Plant Pathol J. 2018 Feb;34(1):1-10. doi: 10.5423/PPJ.OA.06.2017.0128. Epub 2018 Feb 1.

6.

High-Quality Draft Genome Sequence of Curtobacterium sp. Strain Ferrero.

Osdaghi E, Forero Serna N, Bolot S, Fischer-Le Saux M, Jacques MA, Portier P, Carrère S, Koebnik R.

Genome Announc. 2017 Nov 30;5(48). pii: e01378-17. doi: 10.1128/genomeA.01378-17.

7.

Transcriptome and proteome analysis reveal new insight into proximal and distal responses of wheat to foliar infection by Xanthomonas translucens.

Garcia-Seco D, Chiapello M, Bracale M, Pesce C, Bagnaresi P, Dubois E, Moulin L, Vannini C, Koebnik R.

Sci Rep. 2017 Aug 31;7(1):10157. doi: 10.1038/s41598-017-10568-8.

8.

Comparative Genomics Identifies a Novel Conserved Protein, HpaT, in Proteobacterial Type III Secretion Systems that Do Not Possess the Putative Translocon Protein HrpF.

Pesce C, Jacobs JM, Berthelot E, Perret M, Vancheva T, Bragard C, Koebnik R.

Front Microbiol. 2017 Jun 26;8:1177. doi: 10.3389/fmicb.2017.01177. eCollection 2017.

9.

Effector Mimics and Integrated Decoys, the Never-Ending Arms Race between Rice and Xanthomonas oryzae.

Zuluaga P, Szurek B, Koebnik R, Kroj T, Morel JB.

Front Plant Sci. 2017 Mar 28;8:431. doi: 10.3389/fpls.2017.00431. eCollection 2017. Review.

10.

Characterization of the Xanthomonas translucens Complex Using Draft Genomes, Comparative Genomics, Phylogenetic Analysis, and Diagnostic LAMP Assays.

Langlois PA, Snelling J, Hamilton JP, Bragard C, Koebnik R, Verdier V, Triplett LR, Blom J, Tisserat NA, Leach JE.

Phytopathology. 2017 May;107(5):519-527. doi: 10.1094/PHYTO-08-16-0286-R. Epub 2017 Mar 28.

11.

Whole-Genome Sequences of Xanthomonas euvesicatoria Strains Clarify Taxonomy and Reveal a Stepwise Erosion of Type 3 Effectors.

Barak JD, Vancheva T, Lefeuvre P, Jones JB, Timilsina S, Minsavage GV, Vallad GE, Koebnik R.

Front Plant Sci. 2016 Dec 9;7:1805. doi: 10.3389/fpls.2016.01805. eCollection 2016.

12.

Ectopic activation of the rice NLR heteropair RGA4/RGA5 confers resistance to bacterial blight and bacterial leaf streak diseases.

Hutin M, Césari S, Chalvon V, Michel C, Tran TT, Boch J, Koebnik R, Szurek B, Kroj T.

Plant J. 2016 Oct;88(1):43-55. doi: 10.1111/tpj.13231. Epub 2016 Aug 18.

13.

High-Quality Draft Genome Sequences of Two Xanthomonas Pathotype Strains Infecting Aroid Plants.

Robène I, Bolot S, Pruvost O, Arlat M, Noël LD, Carrère S, Jacques MA, Koebnik R, Gagnevin L.

Genome Announc. 2016 Sep 1;4(5). pii: e00902-16. doi: 10.1128/genomeA.00902-16.

14.

Targeted promoter editing for rice resistance to Xanthomonas oryzae pv. oryzae reveals differential activities for SWEET14-inducing TAL effectors.

Blanvillain-Baufumé S, Reschke M, Solé M, Auguy F, Doucoure H, Szurek B, Meynard D, Portefaix M, Cunnac S, Guiderdoni E, Boch J, Koebnik R.

Plant Biotechnol J. 2017 Mar;15(3):306-317. doi: 10.1111/pbi.12613. Epub 2016 Dec 17.

15.

Using Ecology, Physiology, and Genomics to Understand Host Specificity in Xanthomonas.

Jacques MA, Arlat M, Boulanger A, Boureau T, Carrère S, Cesbron S, Chen NW, Cociancich S, Darrasse A, Denancé N, Fischer-Le Saux M, Gagnevin L, Koebnik R, Lauber E, Noël LD, Pieretti I, Portier P, Pruvost O, Rieux A, Robène I, Royer M, Szurek B, Verdier V, Vernière C.

Annu Rev Phytopathol. 2016 Aug 4;54:163-87. doi: 10.1146/annurev-phyto-080615-100147. Epub 2016 Jan 1. Review.

PMID:
27296145
16.

AnnoTALE: bioinformatics tools for identification, annotation, and nomenclature of TALEs from Xanthomonas genomic sequences.

Grau J, Reschke M, Erkes A, Streubel J, Morgan RD, Wilson GG, Koebnik R, Boch J.

Sci Rep. 2016 Feb 15;6:21077. doi: 10.1038/srep21077.

17.

Genomics and transcriptomics of Xanthomonas campestris species challenge the concept of core type III effectome.

Roux B, Bolot S, Guy E, Denancé N, Lautier M, Jardinaud MF, Fischer-Le Saux M, Portier P, Jacques MA, Gagnevin L, Pruvost O, Lauber E, Arlat M, Carrère S, Koebnik R, Noël LD.

BMC Genomics. 2015 Nov 18;16:975. doi: 10.1186/s12864-015-2190-0.

18.

Draft Genome Sequence of Xanthomonas translucens pv. graminis Pathotype Strain CFBP 2053.

Pesce C, Bolot S, Berthelot E, Bragard C, Cunnac S, Fischer-Le Saux M, Portier P, Arlat M, Gagnevin L, Jacques MA, Noël LD, Carrère S, Koebnik R.

Genome Announc. 2015 Oct 8;3(5). pii: e01174-15. doi: 10.1128/genomeA.01174-15.

19.

A knowledge-based molecular screen uncovers a broad-spectrum OsSWEET14 resistance allele to bacterial blight from wild rice.

Hutin M, Sabot F, Ghesquière A, Koebnik R, Szurek B.

Plant J. 2015 Nov;84(4):694-703. doi: 10.1111/tpj.13042.

20.

Comparative genomics of a cannabis pathogen reveals insight into the evolution of pathogenicity in Xanthomonas.

Jacobs JM, Pesce C, Lefeuvre P, Koebnik R.

Front Plant Sci. 2015 Jun 16;6:431. doi: 10.3389/fpls.2015.00431. eCollection 2015.

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