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Items: 17

1.

Selective binding of the PHD6 finger of MLL4 to histone H4K16ac links MLL4 and MOF.

Zhang Y, Jang Y, Lee JE, Ahn J, Xu L, Holden MR, Cornett EM, Krajewski K, Klein BJ, Wang SP, Dou Y, Roeder RG, Strahl BD, Rothbart SB, Shi X, Ge K, Kutateladze TG.

Nat Commun. 2019 May 24;10(1):2314. doi: 10.1038/s41467-019-10324-8.

2.

A DNA methylation reader complex that enhances gene transcription.

Harris CJ, Scheibe M, Wongpalee SP, Liu W, Cornett EM, Vaughan RM, Li X, Chen W, Xue Y, Zhong Z, Yen L, Barshop WD, Rayatpisheh S, Gallego-Bartolome J, Groth M, Wang Z, Wohlschlegel JA, Du J, Rothbart SB, Butter F, Jacobsen SE.

Science. 2018 Dec 7;362(6419):1182-1186. doi: 10.1126/science.aar7854.

PMID:
30523112
3.

A functional proteomics platform to reveal the sequence determinants of lysine methyltransferase substrate selectivity.

Cornett EM, Dickson BM, Krajewski K, Spellmon N, Umstead A, Vaughan RM, Shaw KM, Versluis PP, Cowles MW, Brunzelle J, Yang Z, Vega IE, Sun ZW, Rothbart SB.

Sci Adv. 2018 Nov 28;4(11):eaav2623. doi: 10.1126/sciadv.aav2623. eCollection 2018 Nov.

4.

Examining the Roles of H3K4 Methylation States with Systematically Characterized Antibodies.

Shah RN, Grzybowski AT, Cornett EM, Johnstone AL, Dickson BM, Boone BA, Cheek MA, Cowles MW, Maryanski D, Meiners MJ, Tiedemann RL, Vaughan RM, Arora N, Sun ZW, Rothbart SB, Keogh MC, Ruthenburg AJ.

Mol Cell. 2018 Oct 4;72(1):162-177.e7. doi: 10.1016/j.molcel.2018.08.015. Epub 2018 Sep 20.

PMID:
30244833
5.

Chromatin structure and its chemical modifications regulate the ubiquitin ligase substrate selectivity of UHRF1.

Vaughan RM, Dickson BM, Whelihan MF, Johnstone AL, Cornett EM, Cheek MA, Ausherman CA, Cowles MW, Sun ZW, Rothbart SB.

Proc Natl Acad Sci U S A. 2018 Aug 28;115(35):8775-8780. doi: 10.1073/pnas.1806373115. Epub 2018 Aug 13.

6.

Comparative biochemical analysis of UHRF proteins reveals molecular mechanisms that uncouple UHRF2 from DNA methylation maintenance.

Vaughan RM, Dickson BM, Cornett EM, Harrison JS, Kuhlman B, Rothbart SB.

Nucleic Acids Res. 2018 May 18;46(9):4405-4416. doi: 10.1093/nar/gky151.

7.

Analysis of Histone Antibody Specificity with Peptide Microarrays.

Cornett EM, Dickson BM, Rothbart SB.

J Vis Exp. 2017 Aug 1;(126). doi: 10.3791/55912.

8.

Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq.

Busby M, Xue C, Li C, Farjoun Y, Gienger E, Yofe I, Gladden A, Epstein CB, Cornett EM, Rothbart SB, Nusbaum C, Goren A.

Epigenetics Chromatin. 2016 Nov 4;9:49. eCollection 2016.

9.

Multivalent Chromatin Engagement and Inter-domain Crosstalk Regulate MORC3 ATPase.

Andrews FH, Tong Q, Sullivan KD, Cornett EM, Zhang Y, Ali M, Ahn J, Pandey A, Guo AH, Strahl BD, Costello JC, Espinosa JM, Rothbart SB, Kutateladze TG.

Cell Rep. 2016 Sep 20;16(12):3195-3207. doi: 10.1016/j.celrep.2016.08.050.

10.

Hemi-methylated DNA regulates DNA methylation inheritance through allosteric activation of H3 ubiquitylation by UHRF1.

Harrison JS, Cornett EM, Goldfarb D, DaRosa PA, Li ZM, Yan F, Dickson BM, Guo AH, Cantu DV, Kaustov L, Brown PJ, Arrowsmith CH, Erie DA, Major MB, Klevit RE, Krajewski K, Kuhlman B, Strahl BD, Rothbart SB.

Elife. 2016 Sep 6;5. pii: e17101. doi: 10.7554/eLife.17101.

11.

Nuclease-containing media for resettable operation of DNA logic gates.

O'Steen MR, Cornett EM, Kolpashchikov DM.

Chem Commun (Camb). 2015 Jan 28;51(8):1429-31. doi: 10.1039/c4cc09283j.

PMID:
25493931
12.

Deoxyribozyme cascade for visual detection of bacterial RNA.

Gerasimova YV, Cornett EM, Edwards E, Su X, Rohde KH, Kolpashchikov DM.

Chembiochem. 2013 Nov 4;14(16):2087-90. doi: 10.1002/cbic.201300471. Epub 2013 Sep 17.

13.

SNP analysis using a molecular beacon-based operating cooperatively (OC) sensor.

Cornett EM, Kolpashchikov DM.

Methods Mol Biol. 2013;1039:81-6. doi: 10.1007/978-1-62703-535-4_6.

PMID:
24026687
14.

Operating Cooperatively (OC) sensor for highly specific recognition of nucleic acids.

Cornett EM, O'Steen MR, Kolpashchikov DM.

PLoS One. 2013;8(2):e55919. doi: 10.1371/journal.pone.0055919. Epub 2013 Feb 18.

15.

Two-component covalent inhibitor.

Cornett EM, Gerasimova YV, Kolpashchikov DM.

Bioorg Med Chem. 2013 Apr 1;21(7):1988-91. doi: 10.1016/j.bmc.2013.01.021. Epub 2013 Jan 22.

16.

Molecular logic gates for DNA analysis: detection of rifampin resistance in M. tuberculosis DNA.

Cornett EM, Campbell EA, Gulenay G, Peterson E, Bhaskar N, Kolpashchikov DM.

Angew Chem Int Ed Engl. 2012 Sep 3;51(36):9075-7. doi: 10.1002/anie.201203708. Epub 2012 Aug 9.

17.

RNA-cleaving deoxyribozyme sensor for nucleic acid analysis: the limit of detection.

Gerasimova YV, Cornett E, Kolpashchikov DM.

Chembiochem. 2010 Apr 12;11(6):811-7, 729. doi: 10.1002/cbic.201000006.

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