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Items: 1 to 20 of 28

1.

The UPF1 interactome reveals interaction networks between RNA degradation and translation repression factors in Arabidopsis.

Chicois C, Scheer H, Garcia S, Zuber H, Mutterer J, Chicher J, Hammann P, Gagliardi D, Garcia D.

Plant J. 2018 Oct;96(1):119-132. doi: 10.1111/tpj.14022. Epub 2018 Aug 1.

PMID:
29983000
2.

RNA degradation by the plant RNA exosome involves both phosphorolytic and hydrolytic activities.

Sikorska N, Zuber H, Gobert A, Lange H, Gagliardi D.

Nat Commun. 2017 Dec 18;8(1):2162. doi: 10.1038/s41467-017-02066-2.

3.

RNA uridylation: a key posttranscriptional modification shaping the coding and noncoding transcriptome.

De Almeida C, Scheer H, Zuber H, Gagliardi D.

Wiley Interdiscip Rev RNA. 2018 Jan;9(1). doi: 10.1002/wrna.1440. Epub 2017 Oct 5. Review.

PMID:
28984054
4.

Uridylation Earmarks mRNAs for Degradation… and More.

Scheer H, Zuber H, De Almeida C, Gagliardi D.

Trends Genet. 2016 Oct;32(10):607-619. doi: 10.1016/j.tig.2016.08.003. Epub 2016 Sep 1. Review.

PMID:
27592415
5.

Correction: The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis.

Hématy K, Bellec Y, Podicheti R, Bouteiller N, Anne P, Morineau C, Haslam RP, Beaudoin F, Napier JA, Mockaitis K, Gagliardi D, Vaucheret H, Lange H, Faure JD.

PLoS Genet. 2016 Mar 23;12(3):e1005958. doi: 10.1371/journal.pgen.1005958. eCollection 2016 Mar. No abstract available.

6.

Uridylation and PABP Cooperate to Repair mRNA Deadenylated Ends in Arabidopsis.

Zuber H, Scheer H, Ferrier E, Sement FM, Mercier P, Stupfler B, Gagliardi D.

Cell Rep. 2016 Mar 22;14(11):2707-17. doi: 10.1016/j.celrep.2016.02.060. Epub 2016 Mar 10.

7.

The Zinc-Finger Protein SOP1 Is Required for a Subset of the Nuclear Exosome Functions in Arabidopsis.

Hématy K, Bellec Y, Podicheti R, Bouteiller N, Anne P, Morineau C, Haslam RP, Beaudoin F, Napier JA, Mockaitis K, Gagliardi D, Vaucheret H, Lange H, Faure JD.

PLoS Genet. 2016 Feb 1;12(2):e1005817. doi: 10.1371/journal.pgen.1005817. eCollection 2016 Feb. Erratum in: PLoS Genet. 2016 Mar;12(3):e1005958.

8.

SKI2 mediates degradation of RISC 5'-cleavage fragments and prevents secondary siRNA production from miRNA targets in Arabidopsis.

Branscheid A, Marchais A, Schott G, Lange H, Gagliardi D, Andersen SU, Voinnet O, Brodersen P.

Nucleic Acids Res. 2015 Dec 15;43(22):10975-88. doi: 10.1093/nar/gkv1014. Epub 2015 Oct 12.

9.

Distinct 18S rRNA precursors are targets of the exosome complex, the exoribonuclease RRP6L2 and the terminal nucleotidyltransferase TRL in Arabidopsis thaliana.

Sikorski PJ, Zuber H, Philippe L, Sement FM, Canaday J, Kufel J, Gagliardi D, Lange H.

Plant J. 2015 Sep;83(6):991-1004. doi: 10.1111/tpj.12943.

10.

The RNA helicases AtMTR4 and HEN2 target specific subsets of nuclear transcripts for degradation by the nuclear exosome in Arabidopsis thaliana.

Lange H, Zuber H, Sement FM, Chicher J, Kuhn L, Hammann P, Brunaud V, Bérard C, Bouteiller N, Balzergue S, Aubourg S, Martin-Magniette ML, Vaucheret H, Gagliardi D.

PLoS Genet. 2014 Aug 21;10(8):e1004564. doi: 10.1371/journal.pgen.1004564. eCollection 2014 Aug.

11.

Detection of uridylated mRNAs.

Sement FM, Gagliardi D.

Methods Mol Biol. 2014;1125:43-51. doi: 10.1007/978-1-62703-971-0_4.

PMID:
24590778
12.

Uridylation prevents 3' trimming of oligoadenylated mRNAs.

Sement FM, Ferrier E, Zuber H, Merret R, Alioua M, Deragon JM, Bousquet-Antonelli C, Lange H, Gagliardi D.

Nucleic Acids Res. 2013 Aug;41(14):7115-27. doi: 10.1093/nar/gkt465. Epub 2013 Jun 6.

13.

Plant Exosomes and Cofactors.

Lange H, Gagliardi D.

Enzymes. 2012;31:31-52. doi: 10.1016/B978-0-12-404740-2.00002-1. Epub 2012 Sep 29.

PMID:
27166439
14.

The exosome and 3'-5' RNA degradation in plants.

Lange H, Gagliardi D.

Adv Exp Med Biol. 2011;702:50-62. doi: 10.1007/978-1-4419-7841-7_5.

PMID:
21713677
15.

MTR4, a putative RNA helicase and exosome co-factor, is required for proper rRNA biogenesis and development in Arabidopsis thaliana.

Lange H, Sement FM, Gagliardi D.

Plant J. 2011 Oct;68(1):51-63. doi: 10.1111/j.1365-313X.2011.04675.x. Epub 2011 Jul 25. Erratum in: Plant J. 2017 Jul;91(2):355-356.

16.

The exosome and 3'-5' RNA degradation in plants.

Lange H, Gagliardi D.

Adv Exp Med Biol. 2010;702:50-62.

PMID:
21618874
17.

Polyadenylation-assisted RNA degradation processes in plants.

Lange H, Sement FM, Canaday J, Gagliardi D.

Trends Plant Sci. 2009 Sep;14(9):497-504. doi: 10.1016/j.tplants.2009.06.007. Epub 2009 Aug 27. Review.

PMID:
19716749
18.

Polyadenylation-mediated RNA degradation in plant mitochondria.

Holec S, Lange H, Dietrich A, Gagliardi D.

Methods Enzymol. 2008;447:439-61. doi: 10.1016/S0076-6879(08)02221-0.

PMID:
19161855
19.

Coping with cryptic and defective transcripts in plant mitochondria.

Holec S, Lange H, Canaday J, Gagliardi D.

Biochim Biophys Acta. 2008 Sep;1779(9):566-73. doi: 10.1016/j.bbagrm.2008.02.004. Epub 2008 Feb 15. Review.

PMID:
18325351
20.

Degradation of a polyadenylated rRNA maturation by-product involves one of the three RRP6-like proteins in Arabidopsis thaliana.

Lange H, Holec S, Cognat V, Pieuchot L, Le Ret M, Canaday J, Gagliardi D.

Mol Cell Biol. 2008 May;28(9):3038-44. doi: 10.1128/MCB.02064-07. Epub 2008 Feb 19.

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