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Items: 1 to 20 of 225

1.

Mimiviridae: An Expanding Family of Highly Diverse Large dsDNA Viruses Infecting a Wide Phylogenetic Range of Aquatic Eukaryotes.

Claverie JM, Abergel C.

Viruses. 2018 Sep 18;10(9). pii: E506. doi: 10.3390/v10090506. Review.

2.

Exploring the microbiome of the "star" freshwater diatom Asterionella formosa in a laboratory context.

Kojadinovic-Sirinelli M, Villain A, Puppo C, Fon Sing S, Prioretti L, Hubert P, Grégori G, Zhang Y, Sassi JF, Claverie JM, Blanc G, Gontero B.

Environ Microbiol. 2018 Oct;20(10):3601-3615. doi: 10.1111/1462-2920.14337. Epub 2018 Oct 10.

PMID:
30063098
3.

ACDtool: a web-server for the generic analysis of large data sets of counts.

Claverie JM, Ta TN.

Bioinformatics. 2018 Jul 18. doi: 10.1093/bioinformatics/bty640. [Epub ahead of print]

PMID:
30020402
4.

Diversity and evolution of the emerging Pandoraviridae family.

Legendre M, Fabre E, Poirot O, Jeudy S, Lartigue A, Alempic JM, Beucher L, Philippe N, Bertaux L, Christo-Foroux E, Labadie K, Couté Y, Abergel C, Claverie JM.

Nat Commun. 2018 Jun 11;9(1):2285. doi: 10.1038/s41467-018-04698-4.

5.

New genomic data and analyses challenge the traditional vision of animal epithelium evolution.

Belahbib H, Renard E, Santini S, Jourda C, Claverie JM, Borchiellini C, Le Bivic A.

BMC Genomics. 2018 May 24;19(1):393. doi: 10.1186/s12864-018-4715-9.

6.

Cryo-EM structure of a Marseilleviridae virus particle reveals a large internal microassembly.

Okamoto K, Miyazaki N, Reddy HKN, Hantke MF, Maia FRNC, Larsson DSD, Abergel C, Claverie JM, Hajdu J, Murata K, Svenda M.

Virology. 2018 Mar;516:239-245. doi: 10.1016/j.virol.2018.01.021.

PMID:
29407382
7.

Structural variability and complexity of the giant Pithovirus sibericum particle revealed by high-voltage electron cryo-tomography and energy-filtered electron cryo-microscopy.

Okamoto K, Miyazaki N, Song C, Maia FRNC, Reddy HKN, Abergel C, Claverie JM, Hajdu J, Svenda M, Murata K.

Sci Rep. 2017 Oct 16;7(1):13291. doi: 10.1038/s41598-017-13390-4.

8.

Re-emerging infectious diseases from the past: Hysteria or real risk?

Charlier P, Claverie JM, Sansonetti P, Coppens Y, Augias A, Jacqueline S, Rengot F, Deo S.

Eur J Intern Med. 2017 Oct;44:28-30. doi: 10.1016/j.ejim.2017.06.018. Epub 2017 Jun 20.

9.
10.

Noumeavirus replication relies on a transient remote control of the host nucleus.

Fabre E, Jeudy S, Santini S, Legendre M, Trauchessec M, Couté Y, Claverie JM, Abergel C.

Nat Commun. 2017 Apr 21;8:15087. doi: 10.1038/ncomms15087.

11.

[Giant viruses: update, enigmas, controversies and perspectives].

Claverie JM, Abergel C.

Med Sci (Paris). 2016 Dec;32(12):1087-1096. doi: 10.1051/medsci/20163212012. Epub 2017 Jan 3. Review. French.

12.

Single-shot diffraction data from the Mimivirus particle using an X-ray free-electron laser.

Ekeberg T, Svenda M, Seibert MM, Abergel C, Maia FR, Seltzer V, DePonte DP, Aquila A, Andreasson J, Iwan B, Jönsson O, Westphal D, Odić D, Andersson I, Barty A, Liang M, Martin AV, Gumprecht L, Fleckenstein H, Bajt S, Barthelmess M, Coppola N, Claverie JM, Loh ND, Bostedt C, Bozek JD, Krzywinski J, Messerschmidt M, Bogan MJ, Hampton CY, Sierra RG, Frank M, Shoeman RL, Lomb L, Foucar L, Epp SW, Rolles D, Rudenko A, Hartmann R, Hartmann A, Kimmel N, Holl P, Weidenspointner G, Rudek B, Erk B, Kassemeyer S, Schlichting I, Strüder L, Ullrich J, Schmidt C, Krasniqi F, Hauser G, Reich C, Soltau H, Schorb S, Hirsemann H, Wunderer C, Graafsma H, Chapman H, Hajdu J.

Sci Data. 2016 Aug 1;3:160060. doi: 10.1038/sdata.2016.60.

13.

CRISPR-Cas-like system in giant viruses: why MIMIVIRE is not likely to be an adaptive immune system.

Claverie JM, Abergel C.

Virol Sin. 2016 Jun;31(3):193-6. doi: 10.1007/s12250-016-3801-x. No abstract available.

PMID:
27315813
14.

Benthic protists: the under-charted majority.

Forster D, Dunthorn M, Mahé F, Dolan JR, Audic S, Bass D, Bittner L, Boutte C, Christen R, Claverie JM, Decelle J, Edvardsen B, Egge E, Eikrem W, Gobet A, Kooistra WH, Logares R, Massana R, Montresor M, Not F, Ogata H, Pawlowski J, Pernice MC, Romac S, Shalchian-Tabrizi K, Simon N, Richards TA, Santini S, Sarno D, Siano R, Vaulot D, Wincker P, Zingone A, de Vargas C, Stoeck T.

FEMS Microbiol Ecol. 2016 Aug;92(8). pii: fiw120. doi: 10.1093/femsec/fiw120. Epub 2016 Jun 5.

PMID:
27267932
15.

Distribution patterns of microbial communities in ultramafic landscape: a metagenetic approach highlights the strong relationships between diversity and environmental traits.

Bordez L, Jourand P, Ducousso M, Carriconde F, Cavaloc Y, Santini S, Claverie JM, Wantiez L, Leveau A, Amir H.

Mol Ecol. 2016 May;25(10):2258-72. doi: 10.1111/mec.13621. Epub 2016 May 14.

PMID:
26994404
16.

Giant viruses: The difficult breaking of multiple epistemological barriers.

Claverie JM, Abergel C.

Stud Hist Philos Biol Biomed Sci. 2016 Oct;59:89-99. doi: 10.1016/j.shpsc.2016.02.015. Epub 2016 Mar 10.

17.

The 474-Kilobase-Pair Complete Genome Sequence of CeV-01B, a Virus Infecting Haptolina (Chrysochromulina) ericina (Prymnesiophyceae).

Gallot-Lavallée L, Pagarete A, Legendre M, Santini S, Sandaa RA, Himmelbauer H, Ogata H, Bratbak G, Claverie JM.

Genome Announc. 2015 Dec 3;3(6). pii: e01413-15. doi: 10.1128/genomeA.01413-15.

18.

Reverse transcriptase genes are highly abundant and transcriptionally active in marine plankton assemblages.

Lescot M, Hingamp P, Kojima KK, Villar E, Romac S, Veluchamy A, Boccara M, Jaillon O, Iudicone D, Bowler C, Wincker P, Claverie JM, Ogata H.

ISME J. 2016 May;10(5):1134-46. doi: 10.1038/ismej.2015.192. Epub 2015 Nov 27.

19.

Complete Genome Sequence of a New Member of the Marseilleviridae Recovered from the Brackish Submarine Spring in the Cassis Port-Miou Calanque, France.

Doutre G, Arfib B, Rochette P, Claverie JM, Bonin P, Abergel C.

Genome Announc. 2015 Nov 25;3(6). pii: e01148-15. doi: 10.1128/genomeA.01148-15.

20.

The human gene damage index as a gene-level approach to prioritizing exome variants.

Itan Y, Shang L, Boisson B, Patin E, Bolze A, Moncada-Vélez M, Scott E, Ciancanelli MJ, Lafaille FG, Markle JG, Martinez-Barricarte R, de Jong SJ, Kong XF, Nitschke P, Belkadi A, Bustamante J, Puel A, Boisson-Dupuis S, Stenson PD, Gleeson JG, Cooper DN, Quintana-Murci L, Claverie JM, Zhang SY, Abel L, Casanova JL.

Proc Natl Acad Sci U S A. 2015 Nov 3;112(44):13615-20. doi: 10.1073/pnas.1518646112. Epub 2015 Oct 19.

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