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Items: 1 to 20 of 2763

1.

Mocap: large-scale inference of transcription factor binding sites from chromatin accessibility.

Chen X, Yu B, Carriero N, Silva C, Bonneau R.

Nucleic Acids Res. 2017 Mar 15. doi: 10.1093/nar/gkx174. [Epub ahead of print]

PMID:
28334916
2.

ChIP-seq analysis of the LuxR-type regulator VjbR reveals novel insights into the Brucella virulence gene expression network.

Kleinman CL, Sycz G, Bonomi HR, Rodríguez RM, Zorreguieta A, Sieira R.

Nucleic Acids Res. 2017 Mar 11. doi: 10.1093/nar/gkx165. [Epub ahead of print]

PMID:
28334833
3.

Recognition but no repair of abasic site in single-stranded DNA by human ribosomal uS3 protein residing within intact 40S subunit.

Grosheva AS, Zharkov DO, Stahl J, Gopanenko AV, Tupikin AE, Kabilov MR, Graifer DM, Karpova GG.

Nucleic Acids Res. 2017 Jan 30. doi: 10.1093/nar/gkx052. [Epub ahead of print]

PMID:
28334742
4.

An algorithmic perspective of de novo cis-regulatory motif finding based on ChIP-seq data.

Liu B, Yang J, Li Y, McDermaid A, Ma Q.

Brief Bioinform. 2017 Mar 8. doi: 10.1093/bib/bbx026. [Epub ahead of print]

PMID:
28334268
5.

Computational modeling of in vivo and in vitro protein-DNA interactions by multiple instance learning.

Gao Z, Ruan J.

Bioinformatics. 2017 Mar 1. doi: 10.1093/bioinformatics/btx115. [Epub ahead of print]

PMID:
28334224
6.

Global analysis of canola genes targeted by SHORT HYPOCOTYL UNDER BLUE 1 during endosperm and embryo development.

Zhang H, Cheng F, Xiao YG, Kang XJ, Wang X, Kuang R, Ni M.

Plant J. 2017 Mar 23. doi: 10.1111/tpj.13542. [Epub ahead of print]

PMID:
28332746
7.

Behavioral, transcriptomic and epigenetic responses to social challenge in honey bees.

Shpigler HY, Saul MC, Murdoch EE, Cash-Ahmed AC, Seward CH, Sloofman L, Chandrasekaran S, Sinha S, Stubbs LJ, Robinson GE.

Genes Brain Behav. 2017 Mar 22. doi: 10.1111/gbb.12379. [Epub ahead of print]

PMID:
28328153
8.

Atrophin controls developmental signaling pathways via interactions with Trithorax-like.

Yeung K, Boija A, Karlsson E, Holmqvist PH, Tsatskis Y, Nisoli I, Yap DB, Lorzadeh A, Moksa M, Hirst M, Aparicio S, Fanto M, Stenberg P, Mannervik M, McNeill H.

Elife. 2017 Mar 22;6. pii: e23084. doi: 10.7554/eLife.23084. [Epub ahead of print]

9.
10.

Foxh1 Occupies cis-Regulatory Modules Prior to Dynamic Transcription Factor Interactions Controlling the Mesendoderm Gene Program.

Charney RM, Forouzmand E, Cho JS, Cheung J, Paraiso KD, Yasuoka Y, Takahashi S, Taira M, Blitz IL, Xie X, Cho KW.

Dev Cell. 2017 Mar 17. pii: S1534-5807(17)30086-2. doi: 10.1016/j.devcel.2017.02.017. [Epub ahead of print]

PMID:
28325473
11.

NeuroD factors discriminate mineralocorticoid from glucocorticoid receptor DNA binding in the male rat brain.

van Weert LT, Buurstede JC, Mahfouz A, Braakhuis PS, Polman JA, Sips HC, Roozendaal B, Balog J, de Kloet ER, Datson NA, Meijer OC.

Endocrinology. 2017 Jan 24. doi: 10.1210/en.2016-1422. [Epub ahead of print]

PMID:
28324065
12.

Molecular endocrinology of vitamin D on the epigenome level.

Carlberg C.

Mol Cell Endocrinol. 2017 Mar 16. pii: S0303-7207(17)30185-5. doi: 10.1016/j.mce.2017.03.016. [Epub ahead of print] Review.

PMID:
28315703
13.

H3 ubiquitination by NEDD4 regulates H3 acetylation and tumorigenesis.

Zhang X, Li B, Rezaeian AH, Xu X, Chou PC, Jin G, Han F, Pan BS, Wang CY, Long J, Zhang A, Huang CY, Tsai FJ, Tsai CH, Logothetis C, Lin HK.

Nat Commun. 2017 Mar 16;8:14799. doi: 10.1038/ncomms14799.

PMID:
28300060
14.

RUNX1-ETO Leukemia.

Lin S, Mulloy JC, Goyama S.

Adv Exp Med Biol. 2017;962:151-173. doi: 10.1007/978-981-10-3233-2_11.

PMID:
28299657
15.

MKL1 defines the H3K4Me3 landscape for NF-κB dependent inflammatory response.

Yu L, Fang F, Dai X, Xu H, Qi X, Fang M, Xu Y.

Sci Rep. 2017 Mar 15;7(1):191. doi: 10.1038/s41598-017-00301-w.

16.

Long non-coding RNA NEAT1 is a transcriptional target of p53 and modulates p53-induced transactivation and tumor-suppressor function.

Idogawa M, Ohashi T, Sasaki Y, Nakase H, Tokino T.

Int J Cancer. 2017 Mar 14. doi: 10.1002/ijc.30689. [Epub ahead of print]

PMID:
28295289
17.

Transcriptional landscape of the human cell cycle.

Liu Y, Chen S, Wang S, Soares F, Fischer M, Meng F, Du Z, Lin C, Meyer C, DeCaprio JA, Brown M, Liu XS, He HH.

Proc Natl Acad Sci U S A. 2017 Mar 13. pii: 201617636. doi: 10.1073/pnas.1617636114. [Epub ahead of print]

PMID:
28289232
18.

Bioinformatic approaches to interrogating vitamin D receptor signaling.

Campbell MJ.

Mol Cell Endocrinol. 2017 Mar 10. pii: S0303-7207(17)30180-6. doi: 10.1016/j.mce.2017.03.011. [Epub ahead of print]

PMID:
28288905
19.

Chromatin landscapes and genetic risk for juvenile idiopathic arthritis.

Zhu L, Jiang K, Webber K, Wong L, Liu T, Chen Y, Jarvis JN.

Arthritis Res Ther. 2017 Mar 14;19(1):57. doi: 10.1186/s13075-017-1260-x.

20.

Genome-wide analysis of chromatin structures in Trypanosoma brucei using high-resolution MNase-ChIP-seq.

Wedel C, Siegel TN.

Exp Parasitol. 2017 Mar 9. pii: S0014-4894(17)30140-6. doi: 10.1016/j.exppara.2017.03.003. [Epub ahead of print]

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