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Items: 1 to 20 of 47

1.

Small RNA sequences derived from pre-microRNAs in the supraspliceosome.

Mahlab-Aviv S, Boulos A, Peretz AR, Eliyahu T, Carmel L, Sperling R, Linial M.

Nucleic Acids Res. 2018 Sep 8. doi: 10.1093/nar/gky791. [Epub ahead of print]

PMID:
30203035
2.

Alu exaptation enriches the human transcriptome by introducing new gene ends.

Lavi E, Carmel L.

RNA Biol. 2018;15(6):715-725. doi: 10.1080/15476286.2018.1429880. Epub 2018 Mar 26.

PMID:
29493382
3.

Evidence for convergent evolution of SINE-directed Staufen-mediated mRNA decay.

Lucas BA, Lavi E, Shiue L, Cho H, Katzman S, Miyoshi K, Siomi MC, Carmel L, Ares M Jr, Maquat LE.

Proc Natl Acad Sci U S A. 2018 Jan 30;115(5):968-973. doi: 10.1073/pnas.1715531115. Epub 2018 Jan 16.

4.

Inferring Past Environments from Ancient Epigenomes.

Gokhman D, Malul A, Carmel L.

Mol Biol Evol. 2017 Oct 1;34(10):2429-2438. doi: 10.1093/molbev/msx211.

5.

Identification of introns harboring functional sequence elements through positional conservation.

Chorev M, Joseph Bekker A, Goldberger J, Carmel L.

Sci Rep. 2017 Jun 23;7(1):4201. doi: 10.1038/s41598-017-04476-0.

6.

Gene ORGANizer: linking genes to the organs they affect.

Gokhman D, Kelman G, Amartely A, Gershon G, Tsur S, Carmel L.

Nucleic Acids Res. 2017 Jul 3;45(W1):W138-W145. doi: 10.1093/nar/gkx302.

7.

Archaic Adaptive Introgression in TBX15/WARS2.

Racimo F, Gokhman D, Fumagalli M, Ko A, Hansen T, Moltke I, Albrechtsen A, Carmel L, Huerta-Sánchez E, Nielsen R.

Mol Biol Evol. 2017 Mar 1;34(3):509-524. doi: 10.1093/molbev/msw283.

8.

The role of nucleotide composition in premature termination codon recognition.

Zahdeh F, Carmel L.

BMC Bioinformatics. 2016 Dec 7;17(1):519.

9.

System-wide Analysis of the T Cell Response.

Covacu R, Philip H, Jaronen M, Almeida J, Kenison JE, Darko S, Chao CC, Yaari G, Louzoun Y, Carmel L, Douek DC, Efroni S, Quintana FJ.

Cell Rep. 2016 Mar 22;14(11):2733-44. doi: 10.1016/j.celrep.2016.02.056. Epub 2016 Mar 10.

10.

Expanding the phenotype of CRB2 mutations - A new ciliopathy syndrome?

Jaron R, Rosenfeld N, Zahdeh F, Carmi S, Beni-Adani L, Doviner V, Picard E, Segel R, Zeligson S, Carmel L, Renbaum P, Levy-Lahad E.

Clin Genet. 2016 Dec;90(6):540-544. doi: 10.1111/cge.12764. Epub 2016 May 2.

PMID:
26925547
11.

Epigenetics: It's Getting Old. Past Meets Future in Paleoepigenetics.

Gokhman D, Meshorer E, Carmel L.

Trends Ecol Evol. 2016 Apr;31(4):290-300. doi: 10.1016/j.tree.2016.01.010. Epub 2016 Feb 15. Review.

PMID:
26898827
12.

LEMONS - A Tool for the Identification of Splice Junctions in Transcriptomes of Organisms Lacking Reference Genomes.

Levin L, Bar-Yaacov D, Bouskila A, Chorev M, Carmel L, Mishmar D.

PLoS One. 2015 Nov 25;10(11):e0143329. doi: 10.1371/journal.pone.0143329. eCollection 2015.

13.

JuncDB: an exon-exon junction database.

Chorev M, Guy L, Carmel L.

Nucleic Acids Res. 2016 Jan 4;44(D1):D101-9. doi: 10.1093/nar/gkv1142. Epub 2015 Oct 30.

14.

Combined mineralocorticoid and glucocorticoid deficiency is caused by a novel founder nicotinamide nucleotide transhydrogenase mutation that alters mitochondrial morphology and increases oxidative stress.

Weinberg-Shukron A, Abu-Libdeh A, Zhadeh F, Carmel L, Kogot-Levin A, Kamal L, Kanaan M, Zeligson S, Renbaum P, Levy-Lahad E, Zangen D.

J Med Genet. 2015 Sep;52(9):636-41. doi: 10.1136/jmedgenet-2015-103078. Epub 2015 Jun 12.

PMID:
26070314
15.

Reconstructing the DNA methylation maps of the Neandertal and the Denisovan.

Gokhman D, Lavi E, Prüfer K, Fraga MF, Riancho JA, Kelso J, Pääbo S, Meshorer E, Carmel L.

Science. 2014 May 2;344(6183):523-7. doi: 10.1126/science.1250368. Epub 2014 Apr 17.

16.

Computational identification of functional introns: high positional conservation of introns that harbor RNA genes.

Chorev M, Carmel L.

Nucleic Acids Res. 2013 Jun;41(11):5604-13. doi: 10.1093/nar/gkt244. Epub 2013 Apr 19.

17.

Dependencies among editing sites in serotonin 2C receptor mRNA.

Carmel L, Koonin EV, Dracheva S.

PLoS Comput Biol. 2012;8(9):e1002663. doi: 10.1371/journal.pcbi.1002663. Epub 2012 Sep 6.

18.

ApoB-containing lipoproteins regulate angiogenesis by modulating expression of VEGF receptor 1.

Avraham-Davidi I, Ely Y, Pham VN, Castranova D, Grunspan M, Malkinson G, Gibbs-Bar L, Mayseless O, Allmog G, Lo B, Warren CM, Chen TT, Ungos J, Kidd K, Shaw K, Rogachev I, Wan W, Murphy PM, Farber SA, Carmel L, Shelness GS, Iruela-Arispe ML, Weinstein BM, Yaniv K.

Nat Med. 2012 Jun;18(6):967-73. doi: 10.1038/nm.2759.

19.

The function of introns.

Chorev M, Carmel L.

Front Genet. 2012 Apr 13;3:55. doi: 10.3389/fgene.2012.00055. eCollection 2012.

20.

Origin and evolution of spliceosomal introns.

Rogozin IB, Carmel L, Csuros M, Koonin EV.

Biol Direct. 2012 Apr 16;7:11. doi: 10.1186/1745-6150-7-11. Review.

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