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24 results

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Docking with SwissDock.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:189-202. doi: 10.1007/978-1-4939-9752-7_12. Methods Mol Biol. 2019. PMID: 31452106
Docking with AutoDock4.
Bitencourt-Ferreira G, Pintro VO, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:125-148. doi: 10.1007/978-1-4939-9752-7_9. Methods Mol Biol. 2019. PMID: 31452103
Electrostatic Potential Energy in Protein-Drug Complexes.
Bitencourt-Ferreira G, de Azevedo Junior WF. Bitencourt-Ferreira G, et al. Curr Med Chem. 2021;28(24):4954-4971. doi: 10.2174/0929867328666210201150842. Curr Med Chem. 2021. PMID: 33593246 Review.
Docking with GemDock.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:169-188. doi: 10.1007/978-1-4939-9752-7_11. Methods Mol Biol. 2019. PMID: 31452105
Exploring the Scoring Function Space.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:275-281. doi: 10.1007/978-1-4939-9752-7_17. Methods Mol Biol. 2019. PMID: 31452111
Molecular Docking Simulations with ArgusLab.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:203-220. doi: 10.1007/978-1-4939-9752-7_13. Methods Mol Biol. 2019. PMID: 31452107
Molecular Dynamics Simulations with NAMD2.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:109-124. doi: 10.1007/978-1-4939-9752-7_8. Methods Mol Biol. 2019. PMID: 31452102
Hydrogen Bonds in Protein-Ligand Complexes.
Bitencourt-Ferreira G, Veit-Acosta M, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:93-107. doi: 10.1007/978-1-4939-9752-7_7. Methods Mol Biol. 2019. PMID: 31452101
Molegro Virtual Docker for Docking.
Bitencourt-Ferreira G, de Azevedo WF Jr. Bitencourt-Ferreira G, et al. Methods Mol Biol. 2019;2053:149-167. doi: 10.1007/978-1-4939-9752-7_10. Methods Mol Biol. 2019. PMID: 31452104
Taba: A Tool to Analyze the Binding Affinity.
da Silva AD, Bitencourt-Ferreira G, de Azevedo WF Jr. da Silva AD, et al. Among authors: bitencourt ferreira g. J Comput Chem. 2020 Jan 5;41(1):69-73. doi: 10.1002/jcc.26048. Epub 2019 Aug 13. J Comput Chem. 2020. PMID: 31410856
24 results