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Items: 1 to 20 of 57

1.

A Bayesian framework for high-throughput T cell receptor pairing.

Holec PV, Berleant J, Bathe M, Birnbaum ME.

Bioinformatics. 2018 Sep 12. doi: 10.1093/bioinformatics/bty801. [Epub ahead of print]

PMID:
30215679
2.

Molecular model of J-aggregated pseudoisocyanine fibers.

Bricker WP, Banal JL, Stone MB, Bathe M.

J Chem Phys. 2018 Jul 14;149(2):024905. doi: 10.1063/1.5036656.

PMID:
30007374
3.

Normative reference data, determinants, and clinical implications of right atrial reservoir function in women assessed by 2D speckle-tracking echocardiography.

Brand A, Bathe M, Hübscher A, Baldenhofer G, Hättasch R, Seeland U, Oertelt-Prigione S, Rücke M, Regitz-Zagrosek V, Stangl K, Dreger H, Stangl V, Knebel F.

Echocardiography. 2018 Oct;35(10):1542-1549. doi: 10.1111/echo.14092. Epub 2018 Jul 1.

PMID:
29962056
4.

In vitro synthesis of gene-length single-stranded DNA.

Veneziano R, Shepherd TR, Ratanalert S, Bellou L, Tao C, Bathe M.

Sci Rep. 2018 Apr 25;8(1):6548. doi: 10.1038/s41598-018-24677-5.

5.

Programmed coherent coupling in a synthetic DNA-based excitonic circuit.

Boulais É, Sawaya NPD, Veneziano R, Andreoni A, Banal JL, Kondo T, Mandal S, Lin S, Schlau-Cohen GS, Woodbury NW, Yan H, Aspuru-Guzik A, Bathe M.

Nat Mater. 2018 Feb;17(2):159-166. doi: 10.1038/nmat5033. Epub 2017 Nov 13.

PMID:
29180771
6.

Photophysics of J-Aggregate-Mediated Energy Transfer on DNA.

Banal JL, Kondo T, Veneziano R, Bathe M, Schlau-Cohen GS.

J Phys Chem Lett. 2017 Dec 7;8(23):5827-5833. doi: 10.1021/acs.jpclett.7b01898. Epub 2017 Nov 16.

PMID:
29144136
7.

Right heart function in impaired left ventricular diastolic function: 2D speckle tracking echocardiography-based and Doppler tissue imaging-based analysis of right atrial and ventricular function.

Brand A, Bathe M, Oertelt-Prigione S, Seeland U, Rücke M, Regitz-Zagrosek V, Stangl K, Knebel F, Stangl V, Dreger H.

Echocardiography. 2018 Jan;35(1):47-55. doi: 10.1111/echo.13745. Epub 2017 Nov 6.

PMID:
29106754
8.

Optical determination of the electronic coupling and intercalation geometry of thiazole orange homodimer in DNA.

Cunningham PD, Bricker WP, Díaz SA, Medintz IL, Bathe M, Melinger JS.

J Chem Phys. 2017 Aug 7;147(5):055101. doi: 10.1063/1.4995431.

PMID:
28789556
9.

Structure and conformational dynamics of scaffolded DNA origami nanoparticles.

Pan K, Bricker WP, Ratanalert S, Bathe M.

Nucleic Acids Res. 2017 Jun 20;45(11):6284-6298. doi: 10.1093/nar/gkx378.

10.

A Regulatory Switch Alters Chromosome Motions at the Metaphase-to-Anaphase Transition.

Su KC, Barry Z, Schweizer N, Maiato H, Bathe M, Cheeseman IM.

Cell Rep. 2016 Nov 8;17(7):1728-1738. doi: 10.1016/j.celrep.2016.10.046.

11.

Designer nanoscale DNA assemblies programmed from the top down.

Veneziano R, Ratanalert S, Zhang K, Zhang F, Yan H, Chiu W, Bathe M.

Science. 2016 Jun 24;352(6293):1534. doi: 10.1126/science.aaf4388. Epub 2016 May 26.

12.

Programming Self-Assembly of DNA Origami Honeycomb Two-Dimensional Lattices and Plasmonic Metamaterials.

Wang P, Gaitanaros S, Lee S, Bathe M, Shih WM, Ke Y.

J Am Chem Soc. 2016 Jun 22;138(24):7733-40. doi: 10.1021/jacs.6b03966. Epub 2016 Jun 9.

PMID:
27224641
13.

Advancing multiscale structural mapping of the brain through fluorescence imaging and analysis across length scales.

Hogstrom LJ, Guo SM, Murugadoss K, Bathe M.

Interface Focus. 2016 Feb 6;6(1):20150081. doi: 10.1098/rsfs.2015.0081.

14.

Rational design of DNA-actuated enzyme nanoreactors guided by single molecule analysis.

Dhakal S, Adendorff MR, Liu M, Yan H, Bathe M, Walter NG.

Nanoscale. 2016 Feb 7;8(5):3125-37. doi: 10.1039/c5nr07263h.

PMID:
26788713
15.

Mapping translation 'hot-spots' in live cells by tracking single molecules of mRNA and ribosomes.

Katz ZB, English BP, Lionnet T, Yoon YJ, Monnier N, Ovryn B, Bathe M, Singer RH.

Elife. 2016 Jan 13;5. pii: e10415. doi: 10.7554/eLife.10415.

16.

Time series modeling of live-cell shape dynamics for image-based phenotypic profiling.

Gordonov S, Hwang MK, Wells A, Gertler FB, Lauffenburger DA, Bathe M.

Integr Biol (Camb). 2016 Jan;8(1):73-90. doi: 10.1039/c5ib00283d. Epub 2015 Dec 11.

17.

Computing Nonequilibrium Conformational Dynamics of Structured Nucleic Acid Assemblies.

Sedeh RS, Pan K, Adendorff MR, Hallatschek O, Bathe KJ, Bathe M.

J Chem Theory Comput. 2016 Jan 12;12(1):261-73. doi: 10.1021/acs.jctc.5b00965. Epub 2015 Dec 16.

PMID:
26636351
18.

Inferring transient particle transport dynamics in live cells.

Monnier N, Barry Z, Park HY, Su KC, Katz Z, English BP, Dey A, Pan K, Cheeseman IM, Singer RH, Bathe M.

Nat Methods. 2015 Sep;12(9):838-40. doi: 10.1038/nmeth.3483. Epub 2015 Jul 20.

19.

Bayesian model selection applied to the analysis of fluorescence correlation spectroscopy data of fluorescent proteins in vitro and in vivo.

Sun G, Guo SM, Teh C, Korzh V, Bathe M, Wohland T.

Anal Chem. 2015 Apr 21;87(8):4326-33. doi: 10.1021/acs.analchem.5b00022. Epub 2015 Apr 8.

20.

Lattice-free prediction of three-dimensional structure of programmed DNA assemblies.

Pan K, Kim DN, Zhang F, Adendorff MR, Yan H, Bathe M.

Nat Commun. 2014 Dec 3;5:5578. doi: 10.1038/ncomms6578.

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