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Year Number of Results
2007 5
2008 2
2009 5
2010 2
2011 2
2012 3
2013 2
2014 1
2024 0

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22 results

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Page 1
Centromere-like regions in the budding yeast genome.
Lefrançois P, Auerbach RK, Yellman CM, Roeder GS, Snyder M. Lefrançois P, et al. Among authors: auerbach rk. PLoS Genet. 2013;9(1):e1003209. doi: 10.1371/journal.pgen.1003209. Epub 2013 Jan 17. PLoS Genet. 2013. PMID: 23349633 Free PMC article.
Mapping accessible chromatin regions using Sono-Seq.
Auerbach RK, Euskirchen G, Rozowsky J, Lamarre-Vincent N, Moqtaderi Z, Lefrançois P, Struhl K, Gerstein M, Snyder M. Auerbach RK, et al. Proc Natl Acad Sci U S A. 2009 Sep 1;106(35):14926-31. doi: 10.1073/pnas.0905443106. Epub 2009 Aug 18. Proc Natl Acad Sci U S A. 2009. PMID: 19706456 Free PMC article.
Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation.
Li G, Ruan X, Auerbach RK, Sandhu KS, Zheng M, Wang P, Poh HM, Goh Y, Lim J, Zhang J, Sim HS, Peh SQ, Mulawadi FH, Ong CT, Orlov YL, Hong S, Zhang Z, Landt S, Raha D, Euskirchen G, Wei CL, Ge W, Wang H, Davis C, Fisher-Aylor KI, Mortazavi A, Gerstein M, Gingeras T, Wold B, Sun Y, Fullwood MJ, Cheung E, Liu E, Sung WK, Snyder M, Ruan Y. Li G, et al. Among authors: auerbach rk. Cell. 2012 Jan 20;148(1-2):84-98. doi: 10.1016/j.cell.2011.12.014. Cell. 2012. PMID: 22265404 Free PMC article.
Genomic islands from five strains of Burkholderia pseudomallei.
Tuanyok A, Leadem BR, Auerbach RK, Beckstrom-Sternberg SM, Beckstrom-Sternberg JS, Mayo M, Wuthiekanun V, Brettin TS, Nierman WC, Peacock SJ, Currie BJ, Wagner DM, Keim P. Tuanyok A, et al. Among authors: auerbach rk. BMC Genomics. 2008 Nov 27;9:566. doi: 10.1186/1471-2164-9-566. BMC Genomics. 2008. PMID: 19038032 Free PMC article.
Integrative analysis of the Caenorhabditis elegans genome by the modENCODE project.
Gerstein MB, Lu ZJ, Van Nostrand EL, Cheng C, Arshinoff BI, Liu T, Yip KY, Robilotto R, Rechtsteiner A, Ikegami K, Alves P, Chateigner A, Perry M, Morris M, Auerbach RK, Feng X, Leng J, Vielle A, Niu W, Rhrissorrakrai K, Agarwal A, Alexander RP, Barber G, Brdlik CM, Brennan J, Brouillet JJ, Carr A, Cheung MS, Clawson H, Contrino S, Dannenberg LO, Dernburg AF, Desai A, Dick L, Dosé AC, Du J, Egelhofer T, Ercan S, Euskirchen G, Ewing B, Feingold EA, Gassmann R, Good PJ, Green P, Gullier F, Gutwein M, Guyer MS, Habegger L, Han T, Henikoff JG, Henz SR, Hinrichs A, Holster H, Hyman T, Iniguez AL, Janette J, Jensen M, Kato M, Kent WJ, Kephart E, Khivansara V, Khurana E, Kim JK, Kolasinska-Zwierz P, Lai EC, Latorre I, Leahey A, Lewis S, Lloyd P, Lochovsky L, Lowdon RF, Lubling Y, Lyne R, MacCoss M, Mackowiak SD, Mangone M, McKay S, Mecenas D, Merrihew G, Miller DM 3rd, Muroyama A, Murray JI, Ooi SL, Pham H, Phippen T, Preston EA, Rajewsky N, Rätsch G, Rosenbaum H, Rozowsky J, Rutherford K, Ruzanov P, Sarov M, Sasidharan R, Sboner A, Scheid P, Segal E, Shin H, Shou C, Slack FJ, Slightam C, Smith R, Spencer WC, Stinson EO, Taing S, Takasaki T, Vafeados D, Voronina K, Wang G, Washing… See abstract for full author list ➔ Gerstein MB, et al. Among authors: auerbach rk. Science. 2010 Dec 24;330(6012):1775-87. doi: 10.1126/science.1196914. Epub 2010 Dec 22. Science. 2010. PMID: 21177976 Free PMC article.
The real cost of sequencing: higher than you think!
Sboner A, Mu XJ, Greenbaum D, Auerbach RK, Gerstein MB. Sboner A, et al. Among authors: auerbach rk. Genome Biol. 2011 Aug 25;12(8):125. doi: 10.1186/gb-2011-12-8-125. Genome Biol. 2011. PMID: 21867570 Free PMC article.
Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing.
Lefrançois P, Euskirchen GM, Auerbach RK, Rozowsky J, Gibson T, Yellman CM, Gerstein M, Snyder M. Lefrançois P, et al. Among authors: auerbach rk. BMC Genomics. 2009 Jan 21;10:37. doi: 10.1186/1471-2164-10-37. BMC Genomics. 2009. PMID: 19159457 Free PMC article.
22 results