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Items: 1 to 20 of 56

1.

Detecting archaic introgression using an unadmixed outgroup.

Skov L, Hui R, Shchur V, Hobolth A, Scally A, Schierup MH, Durbin R.

PLoS Genet. 2018 Sep 18;14(9):e1007641. doi: 10.1371/journal.pgen.1007641. eCollection 2018 Sep.

2.

Evolutionary history and adaptation of a human pygmy population of Flores Island, Indonesia.

Tucci S, Vohr SH, McCoy RC, Vernot B, Robinson MR, Barbieri C, Nelson BJ, Fu W, Purnomo GA, Sudoyo H, Eichler EE, Barbujani G, Visscher PM, Akey JM, Green RE.

Science. 2018 Aug 3;361(6401):511-516. doi: 10.1126/science.aar8486.

PMID:
30072539
3.

Outstanding questions in the study of archaic hominin admixture.

Wolf AB, Akey JM.

PLoS Genet. 2018 May 31;14(5):e1007349. doi: 10.1371/journal.pgen.1007349. eCollection 2018 May. Review.

4.

Natural selection interacts with recombination to shape the evolution of hybrid genomes.

Schumer M, Xu C, Powell DL, Durvasula A, Skov L, Holland C, Blazier JC, Sankararaman S, Andolfatto P, Rosenthal GG, Przeworski M.

Science. 2018 May 11;360(6389):656-660. doi: 10.1126/science.aar3684. Epub 2018 Apr 19.

5.

Analysis of Human Sequence Data Reveals Two Pulses of Archaic Denisovan Admixture.

Browning SR, Browning BL, Zhou Y, Tucci S, Akey JM.

Cell. 2018 Mar 22;173(1):53-61.e9. doi: 10.1016/j.cell.2018.02.031. Epub 2018 Mar 15.

PMID:
29551270
6.

Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago.

Schlebusch CM, Malmström H, Günther T, Sjödin P, Coutinho A, Edlund H, Munters AR, Vicente M, Steyn M, Soodyall H, Lombard M, Jakobsson M.

Science. 2017 Nov 3;358(6363):652-655. doi: 10.1126/science.aao6266. Epub 2017 Sep 28.

PMID:
28971970
7.

Discerning the Origins of the Negritos, First Sundaland People: Deep Divergence and Archaic Admixture.

Jinam TA, Phipps ME, Aghakhanian F, Majumder PP, Datar F, Stoneking M, Sawai H, Nishida N, Tokunaga K, Kawamura S, Omoto K, Saitou N.

Genome Biol Evol. 2017 Aug 1;9(8):2013-2022. doi: 10.1093/gbe/evx118.

8.

Early history of Neanderthals and Denisovans.

Rogers AR, Bohlender RJ, Huff CD.

Proc Natl Acad Sci U S A. 2017 Sep 12;114(37):9859-9863. doi: 10.1073/pnas.1706426114. Epub 2017 Aug 7.

9.

An evolutionary medicine perspective on Neandertal extinction.

Sullivan AP, de Manuel M, Marques-Bonet T, Perry GH.

J Hum Evol. 2017 Jul;108:62-71. doi: 10.1016/j.jhevol.2017.03.004. Epub 2017 May 16.

PMID:
28622932
10.

Meiotic Genes Are Enriched in Regions of Reduced Archaic Ancestry.

Jégou B, Sankararaman S, Rolland AD, Reich D, Chalmel F.

Mol Biol Evol. 2017 Aug 1;34(8):1974-1980. doi: 10.1093/molbev/msx141.

11.

Functional implications of Neandertal introgression in modern humans.

Dannemann M, Prüfer K, Kelso J.

Genome Biol. 2017 Apr 3;18(1):61. doi: 10.1186/s13059-017-1181-7.

12.

A Working Model of the Deep Relationships of Diverse Modern Human Genetic Lineages Outside of Africa.

Lipson M, Reich D.

Mol Biol Evol. 2017 Apr 1;34(4):889-902. doi: 10.1093/molbev/msw293.

13.

[Innate immunity and human diseases: from archaic introgression to natural selection].

Deschamps M, Quintana-Murci L.

Med Sci (Paris). 2016 Dec;32(12):1079-1086. doi: 10.1051/medsci/20163212011. Epub 2017 Jan 3. Review. French.

14.

Archaic Adaptive Introgression in TBX15/WARS2.

Racimo F, Gokhman D, Fumagalli M, Ko A, Hansen T, Moltke I, Albrechtsen A, Carmel L, Huerta-Sánchez E, Nielsen R.

Mol Biol Evol. 2017 Mar 1;34(3):509-524. doi: 10.1093/molbev/msw283.

15.

Chad Genetic Diversity Reveals an African History Marked by Multiple Holocene Eurasian Migrations.

Haber M, Mezzavilla M, Bergström A, Prado-Martinez J, Hallast P, Saif-Ali R, Al-Habori M, Dedoussis G, Zeggini E, Blue-Smith J, Wells RS, Xue Y, Zalloua PA, Tyler-Smith C.

Am J Hum Genet. 2016 Dec 1;99(6):1316-1324. doi: 10.1016/j.ajhg.2016.10.012. Epub 2016 Nov 23.

16.

Archaic Hominin Admixture Facilitated Adaptation to Out-of-Africa Environments.

Gittelman RM, Schraiber JG, Vernot B, Mikacenic C, Wurfel MM, Akey JM.

Curr Biol. 2016 Dec 19;26(24):3375-3382. doi: 10.1016/j.cub.2016.10.041. Epub 2016 Nov 10.

17.

Integrating the signatures of demic expansion and archaic introgression in studies of human population genomics.

Sugden LA, Ramachandran S.

Curr Opin Genet Dev. 2016 Dec;41:140-149. doi: 10.1016/j.gde.2016.09.007. Epub 2016 Oct 13. Review.

18.

Elucidating the origin of HLA-B*73 allelic lineage: Did modern humans benefit by archaic introgression?

Yasukochi Y, Ohashi J.

Immunogenetics. 2017 Jan;69(1):63-67. doi: 10.1007/s00251-016-0952-8. Epub 2016 Sep 30.

19.

Genomic analyses inform on migration events during the peopling of Eurasia.

Pagani L, Lawson DJ, Jagoda E, Mörseburg A, Eriksson A, Mitt M, Clemente F, Hudjashov G, DeGiorgio M, Saag L, Wall JD, Cardona A, Mägi R, Wilson Sayres MA, Kaewert S, Inchley C, Scheib CL, Järve M, Karmin M, Jacobs GS, Antao T, Iliescu FM, Kushniarevich A, Ayub Q, Tyler-Smith C, Xue Y, Yunusbayev B, Tambets K, Mallick CB, Saag L, Pocheshkhova E, Andriadze G, Muller C, Westaway MC, Lambert DM, Zoraqi G, Turdikulova S, Dalimova D, Sabitov Z, Sultana GNN, Lachance J, Tishkoff S, Momynaliev K, Isakova J, Damba LD, Gubina M, Nymadawa P, Evseeva I, Atramentova L, Utevska O, Ricaut FX, Brucato N, Sudoyo H, Letellier T, Cox MP, Barashkov NA, Skaro V, Mulahasanovic L, Primorac D, Sahakyan H, Mormina M, Eichstaedt CA, Lichman DV, Abdullah S, Chaubey G, Wee JTS, Mihailov E, Karunas A, Litvinov S, Khusainova R, Ekomasova N, Akhmetova V, Khidiyatova I, Marjanović D, Yepiskoposyan L, Behar DM, Balanovska E, Metspalu A, Derenko M, Malyarchuk B, Voevoda M, Fedorova SA, Osipova LP, Lahr MM, Gerbault P, Leavesley M, Migliano AB, Petraglia M, Balanovsky O, Khusnutdinova EK, Metspalu E, Thomas MG, Manica A, Nielsen R, Villems R, Willerslev E, Kivisild T, Metspalu M.

Nature. 2016 Oct 13;538(7624):238-242. doi: 10.1038/nature19792. Epub 2016 Sep 21.

20.

Ancient DNA and human history.

Slatkin M, Racimo F.

Proc Natl Acad Sci U S A. 2016 Jun 7;113(23):6380-7. doi: 10.1073/pnas.1524306113. Epub 2016 Jun 6.

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