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Items: 1 to 20 of 74

1.

The Short-chain Dehydrogenase/Reductase Engineering Database (SDRED): A classification and analysis system for a highly diverse enzyme family.

Gräff M, Buchholz PCF, Stockinger P, Bommarius B, Bommarius AS, Pleiss J.

Proteins. 2019 Jun;87(6):443-451. doi: 10.1002/prot.25666. Epub 2019 Feb 25.

PMID:
30714194
2.

Biomolecular Assemblies: Moving from Observation to Predictive Design.

Wilson CJ, Bommarius AS, Champion JA, Chernoff YO, Lynn DG, Paravastu AK, Liang C, Hsieh MC, Heemstra JM.

Chem Rev. 2018 Dec 26;118(24):11519-11574. doi: 10.1021/acs.chemrev.8b00038. Epub 2018 Oct 3.

PMID:
30281290
3.

Photoirradiation Generates an Ultrastable 8-Formyl FAD Semiquinone Radical with Unusual Properties in Formate Oxidase.

Robbins JM, Geng J, Barry BA, Gadda G, Bommarius AS.

Biochemistry. 2018 Oct 9;57(40):5818-5826. doi: 10.1021/acs.biochem.8b00571. Epub 2018 Sep 27.

PMID:
30226367
4.

Modulation of the Formation of Aβ- and Sup35NM-Based Amyloids by Complex Interplay of Specific and Nonspecific Ion Effects.

Sharma A, Behrens SH, Chernoff YO, Bommarius AS.

J Phys Chem B. 2018 May 17;122(19):4972-4981. doi: 10.1021/acs.jpcb.7b12836. Epub 2018 May 3.

PMID:
29668283
5.

A high-throughput pH-based colorimetric assay: application focus on alpha/beta hydrolases.

Paye MF, Rose HB, Robbins JM, Yunda DA, Cho S, Bommarius AS.

Anal Biochem. 2018 May 15;549:80-90. doi: 10.1016/j.ab.2018.03.009. Epub 2018 Mar 16.

PMID:
29551670
6.

Mechanistic studies of formate oxidase from Aspergillus oryzae: A novel member of the glucose-Methanol-choline oxidoreductase enzyme superfamily that oxidizes carbon acids.

Robbins JM, Bommarius AS, Gadda G.

Arch Biochem Biophys. 2018 Apr 2;643:24-31. doi: 10.1016/j.abb.2018.02.007. Epub 2018 Feb 16.

PMID:
29458006
7.

Informing Efforts to Develop Nitroreductase for Amine Production.

Miller AF, Park JT, Ferguson KL, Pitsawong W, Bommarius AS.

Molecules. 2018 Jan 24;23(2). pii: E211. doi: 10.3390/molecules23020211.

8.

Enzyme-Mediated Conversion of Flavin Adenine Dinucleotide (FAD) to 8-Formyl FAD in Formate Oxidase Results in a Modified Cofactor with Enhanced Catalytic Properties.

Robbins JM, Souffrant MG, Hamelberg D, Gadda G, Bommarius AS.

Biochemistry. 2017 Jul 25;56(29):3800-3807. doi: 10.1021/acs.biochem.7b00335. Epub 2017 Jul 11.

PMID:
28640638
9.

Transesterification of propylene glycol methyl ether in chromatographic reactors using anion exchange resin as a catalyst.

Oh J, Sreedhar B, Donaldson ME, Frank TC, Schultz AK, Bommarius AS, Kawajiri Y.

J Chromatogr A. 2016 Sep 30;1466:84-95. doi: 10.1016/j.chroma.2016.08.072. Epub 2016 Sep 1.

PMID:
27623064
10.

Long-term stability of influenza vaccine in a dissolving microneedle patch.

Mistilis MJ, Joyce JC, Esser ES, Skountzou I, Compans RW, Bommarius AS, Prausnitz MR.

Drug Deliv Transl Res. 2017 Apr;7(2):195-205. doi: 10.1007/s13346-016-0282-2.

11.

Contributions of the Prion Protein Sequence, Strain, and Environment to the Species Barrier.

Sharma A, Bruce KL, Chen B, Gyoneva S, Behrens SH, Bommarius AS, Chernoff YO.

J Biol Chem. 2016 Jan 15;291(3):1277-88. doi: 10.1074/jbc.M115.684100. Epub 2015 Nov 12.

12.

Biocatalysis: A Status Report.

Bommarius AS.

Annu Rev Chem Biomol Eng. 2015;6:319-45. doi: 10.1146/annurev-chembioeng-061114-123415. Review.

PMID:
26247293
13.

Green fluorescent protein with anionic tryptophan-based chromophore and long fluorescence lifetime.

Sarkisyan KS, Goryashchenko AS, Lidsky PV, Gorbachev DA, Bozhanova NG, Gorokhovatsky AY, Pereverzeva AR, Ryumina AP, Zherdeva VV, Savitsky AP, Solntsev KM, Bommarius AS, Sharonov GV, Lindquist JR, Drobizhev M, Hughes TE, Rebane A, Lukyanov KA, Mishin AS.

Biophys J. 2015 Jul 21;109(2):380-9. doi: 10.1016/j.bpj.2015.06.018.

14.

Imidazolium Catalysts Formed by an Iterative Synthetic Process as a Model System for Chemical Evolution.

Clairmont RM, Bommarius AS, Weber AL.

J Mol Evol. 2015 Aug;81(1-2):1-9. doi: 10.1007/s00239-015-9687-7. Epub 2015 Jul 21.

PMID:
26194020
15.

Fluorescence imaging using synthetic GFP chromophores.

Walker CL, Lukyanov KA, Yampolsky IV, Mishin AS, Bommarius AS, Duraj-Thatte AM, Azizi B, Tolbert LM, Solntsev KM.

Curr Opin Chem Biol. 2015 Aug;27:64-74. doi: 10.1016/j.cbpa.2015.06.002. Epub 2015 Jun 24. Review.

PMID:
26117808
16.

Hidden photoinduced reactivity of the blue fluorescent protein mKalama1.

Vegh RB, Bloch DA, Bommarius AS, Verkhovsky M, Pletnev S, Iwaï H, Bochenkova AV, Solntsev KM.

Phys Chem Chem Phys. 2015 May 21;17(19):12472-85. doi: 10.1039/c5cp00887e.

PMID:
25805012
17.

Engineering towards nitroreductase functionality in ene-reductase scaffolds.

Park JT, Gómez Ramos LM, Bommarius AS.

Chembiochem. 2015 Mar 23;16(5):811-8. doi: 10.1002/cbic.201402667. Epub 2015 Feb 20.

PMID:
25703443
18.

Development of a thermostable microneedle patch for influenza vaccination.

Mistilis MJ, Bommarius AS, Prausnitz MR.

J Pharm Sci. 2015 Feb;104(2):740-9. doi: 10.1002/jps.24283. Epub 2014 Dec 1.

19.

A novel chimeric amine dehydrogenase shows altered substrate specificity compared to its parent enzymes.

Bommarius BR, Schürmann M, Bommarius AS.

Chem Commun (Camb). 2014 Dec 11;50(95):14953-5. doi: 10.1039/c4cc06527a.

PMID:
25347124
20.

An effective chemical pretreatment method for lignocellulosic biomass with substituted imidazoles.

Kang Y, Realff MJ, Sohn M, Lee JH, Bommarius AS.

Biotechnol Prog. 2015 Jan-Feb;31(1):25-34. doi: 10.1002/btpr.2005. Epub 2014 Oct 24.

PMID:
25311613

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