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Genom Data. 2017 May 12;12:155-156. doi: 10.1016/j.gdata.2017.05.010. eCollection 2017 Jun.

Draft genome of the oomycete pathogen Phytophthora cactorum strain LV007 isolated from European beech (Fagus sylvatica).

Author information

1
Department of Plant Protection biology, Swedish University of Agricultural Sciences, Alnarp, Sweden.
2
Department of Plant Breeding, Swedish University of Agricultural Sciences, Alnarp, Sweden.
3
National Bioinformatics Infrastructure Sweden (NBIS), Department of Biology, Lund University, Lund, Sweden.
4
Southern Swedish Forest Research Centre, Swedish University of Agricultural Sciences, Alnarp, Sweden.
5
Department of Plant Biology, Uppsala BioCenter, Linnean Centre of Plant Biology, Swedish University of Agricultural Sciences, Uppsala, Sweden.
6
Cell and Molecular Sciences, The James Hutton Institute, Invergowrie, Dundee, United Kingdom.

Abstract

Phytophthora cactorum is a broad host range phytopathogenic oomycete. P. cactorum strain LV007 was isolated from a diseased European Beech (Fagus sylvatica) in Malmö, Sweden in 2016. The draft genome of P. cactorum strain LV007 is 67.81 Mb. It contains 15,567 contigs and 21,876 predicted protein-coding genes. As reported for other phytopathogenic Phytophthora species, cytoplasmic effector proteins including RxLR and CRN families were identified. The genome sequence has been deposited at DDBJ/ENA/GenBank under the accession NBIJ00000000. The version described in this paper is version NBIJ01000000.

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