Genetic association analysis between TDP-43 polymorphisms and Alzheimer's disease in a Japanese population

Dement Geriatr Cogn Disord. 2009;28(4):325-9. doi: 10.1159/000251194. Epub 2009 Oct 22.

Abstract

Background/aims: A recent paper reported that the TAR-DNA binding protein (TDP-43) is the disease protein in amyotrophic lateral sclerosis and frontotemporal lobar dementia with ubiquitin-positive inclusions. In addition, it has been shown that TDP-43 may play a role in the pathogenesis of Alzheimer's disease (AD). This study aims to investigate whether single nucleotide polymorphisms (SNPs) of the TDP-43 gene are associated with AD.

Methods: Eight SNPs, genotyped using TaqMan technology, were analyzed using a case-control study design including a haplotype analysis. Furthermore, an analysis of the cases divided according to apolipoprotein E (APO E) status was also carried out. Our case-control dataset consists of 181 AD patients and 130 age-matched controls.

Results: Although none of the SNPs showed statistically significant association, we identified an association between a specific haplotype (G-A-A-G) of the TDP-43 gene and risk for AD. We could not confirm any synergetic association between the SNPs and APO E in our AD patients. Despite the relatively small sample size, our results indicate a possible genetic association between TDP- 43 and AD.

Conclusion: Further genetic studies are needed to clarify the relationship between the TDP-43 gene and AD.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aged
  • Alzheimer Disease / epidemiology*
  • Alzheimer Disease / genetics*
  • Apolipoproteins E / genetics
  • Case-Control Studies
  • DNA / genetics
  • DNA / isolation & purification
  • DNA-Binding Proteins / genetics*
  • Databases, Genetic
  • Female
  • Gene Frequency
  • Humans
  • Introns / genetics
  • Japan / epidemiology
  • Linkage Disequilibrium / genetics
  • Male
  • Middle Aged
  • Odds Ratio
  • Polymorphism, Single Nucleotide / genetics*

Substances

  • Apolipoproteins E
  • DNA-Binding Proteins
  • DNA