Interactions with LC3 and polyubiquitin chains link nbr1 to autophagic protein turnover

FEBS Lett. 2009 Jun 18;583(12):1846-52. doi: 10.1016/j.febslet.2009.04.049. Epub 2009 May 8.

Abstract

Nbr1, a ubiquitous kinase scaffold protein, contains a PB1, and a ubiquitin-associated (UBA) domain. We show here that the nbr1 UBA domain binds to lysine-48 and -63 linked polyubiquitin-B chains. Nbr1 also binds to the autophagic effector protein LC3-A via a novel binding site. Ubiquitin-binding, but not PB1-mediated p62/SQSTM1 interaction, is required to target nbr1 to LC3 and polyubiquitin-positive bodies. Nbr1 binds additionally to proteins implicated in ubiquitin-mediated protein turnover and vesicle trafficking: ubiquitin-specific peptidases USP8, and the endosomal transport regulator p14/Robld3. Nbr1 thus contributes to specific steps in protein turnover regulation disrupted in several hereditary human diseases.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Autophagy / physiology*
  • Binding Sites
  • COS Cells
  • Chlorocebus aethiops
  • Endopeptidases / genetics
  • Endopeptidases / metabolism
  • Endosomal Sorting Complexes Required for Transport
  • Humans
  • In Vitro Techniques
  • Intracellular Signaling Peptides and Proteins
  • Ligands
  • Lysine / chemistry
  • Mice
  • Microtubule-Associated Proteins / genetics
  • Microtubule-Associated Proteins / metabolism*
  • Polyubiquitin / metabolism*
  • Protein Binding
  • Protein Interaction Domains and Motifs
  • Proteins / chemistry
  • Proteins / genetics
  • Proteins / metabolism*
  • Recombinant Fusion Proteins / genetics
  • Recombinant Fusion Proteins / metabolism
  • Two-Hybrid System Techniques
  • Ubiquitin Thiolesterase / genetics
  • Ubiquitin Thiolesterase / metabolism

Substances

  • Endosomal Sorting Complexes Required for Transport
  • Intracellular Signaling Peptides and Proteins
  • Ligands
  • MAP1LC3A protein, human
  • Map1lc3b protein, mouse
  • Microtubule-Associated Proteins
  • NBR1 protein, human
  • Nbr1 protein, mouse
  • Proteins
  • Recombinant Fusion Proteins
  • Polyubiquitin
  • Endopeptidases
  • USP8 protein, human
  • Ubiquitin Thiolesterase
  • Lysine