Structural basis for chitotetraose coordination by CGL3, a novel galectin-related protein from Coprinopsis cinerea

J Mol Biol. 2008 May 23;379(1):146-59. doi: 10.1016/j.jmb.2008.03.062. Epub 2008 Apr 3.

Abstract

Recent advances in genome sequencing efforts have revealed an abundance of novel putative lectins. Among these, many galectin-related proteins, characterized by many conserved residues but intriguingly lacking critical amino acids, have been found in all corners of the eukaryotic superkingdom. Here we present a structural and biochemical analysis of one representative, the galectin-related lectin CGL3 found in the inky cap mushroom Coprinopsis cinerea. This protein contains all but one conserved residues known to be involved in beta-galactoside binding in galectins. A Trp residue strictly conserved among galectins is changed to an Arg in CGL3 (R81). Accordingly, the galectin-related protein is not able to bind lactose. Screening of a glycan array revealed that CGL3 displays preference for oligomers of beta1-4-linked N-acetyl-glucosamines (chitooligosaccharides) and GalNAc beta 1-4GlcNAc (LacdiNAc). Carbohydrate-binding affinity of this novel lectin was quantified using isothermal titration calorimetry, and its mode of chitooligosaccharide coordination not involving any aromatic amino acid residues was studied by X-ray crystallography. Structural information was used to alter the carbohydrate-binding specificity and substrate affinity of CGL3. The importance of residue R81 in determining the carbohydrate-binding specificity was demonstrated by replacing this Arg with a Trp residue (R81W). This single-amino-acid change led to a lectin that failed to bind chitooligosaccharides but gained lactose binding. Our results demonstrate that, similar to the legume lectin fold, the galectin fold represents a conserved structural framework upon which dramatically altered specificities can be grafted by few alterations in the binding site and that, in consequence, many metazoan galectin-related proteins may represent lectins with novel carbohydrate-binding specificities.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Agaricales / enzymology
  • Agaricales / metabolism*
  • Amino Acid Sequence
  • Amino Acid Substitution
  • Conserved Sequence
  • Fungal Proteins / chemistry*
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism
  • Galectin 2 / chemistry
  • Galectin 2 / genetics
  • Galectin 2 / metabolism
  • Galectin 3 / chemistry*
  • Galectin 3 / genetics
  • Galectin 3 / metabolism
  • Molecular Sequence Data
  • Oligosaccharides / chemistry*
  • Oligosaccharides / metabolism
  • Protein Conformation
  • Protein Folding
  • Thermodynamics

Substances

  • Fungal Proteins
  • Galectin 2
  • Galectin 3
  • Oligosaccharides
  • chitotetrose

Associated data

  • PDB/2R0F
  • PDB/2R0H