A combined approach to the molecular analysis of cystinuria: from urinalysis to sequencing via genotyping

Isr Med Assoc J. 2007 Jul;9(7):513-6.

Abstract

Background: Cystinuria is an autosomal recessive disease that is manifested by kidney stones and is caused by mutations in two genes: SLC3AI on chromosome 2p and SLC7A9 on chromosome 19q. Urinary cystine levels in obligate carriers are often, but not always, helpful in identifying the causative gene.

Objectives: To characterize the clinical features and analyze the genetic basis of cystinuria in an inbred Moslem Arab Israeli family.

Methods: Family members were evaluated for urinary cystine and amino acid levels. DNA was initially analyzed with polymorphic markers close to the two genes and SLC7A9 was fully sequenced.

Results: Full segregation was found with the marker close to SLC7A9. Sequencing of this gene revealed a missense mutation, P482L, in the homozygous state in all three affected sibs.

Conclusions: A combination of urinary cystine levels in obligate carriers, segregation analysis with polymorphic markers, and sequencing can save time and resources in the search for cystinuria mutations.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Amino Acid Transport Systems, Basic / genetics*
  • Amino Acids, Diamino / urine
  • Arabs / genetics*
  • Child
  • Child, Preschool
  • Consanguinity*
  • Cystinuria / genetics*
  • Female
  • Genotype
  • Humans
  • Israel
  • Kidney Calculi / genetics
  • Male
  • Mutation, Missense*
  • Pedigree
  • Polymerase Chain Reaction
  • Polymorphism, Genetic
  • Sequence Analysis, DNA
  • Urinalysis

Substances

  • Amino Acid Transport Systems, Basic
  • Amino Acids, Diamino
  • SLC7A9 protein, human