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Items: 1 to 20 of 29


Ontology-Based Meta-Analysis of Animal and Human Adverse Events Associated With Licensed Brucellosis Vaccines.

Xie J, Wang J, Li Z, Wang W, Pang Y, He Y.

Front Pharmacol. 2018 May 15;9:503. doi: 10.3389/fphar.2018.00503. eCollection 2018.


Comparative genomic analysis between newly sequenced Brucella suis Vaccine Strain S2 and the Virulent Brucella suis Strain 1330.

Di DD, Jiang H, Tian LL, Kang JL, Zhang W, Yi XP, Ye F, Zhong Q, Ni B, He YY, Xia L, Yu Y, Cui BY, Mao X, Fan WX.

BMC Genomics. 2016 Sep 20;17(1):741. doi: 10.1186/s12864-016-3076-5.


Literature Mining and Ontology based Analysis of Host-Brucella Gene-Gene Interaction Network.

Karadeniz İ, Hur J, He Y, Özgür A.

Front Microbiol. 2015 Dec 9;6:1386. doi: 10.3389/fmicb.2015.01386. eCollection 2015.


Comparative transcriptome analysis of Brucella melitensis in an acidic environment: Identification of the two-component response regulator involved in the acid resistance and virulence of Brucella.

Liu Q, Liu X, Yan F, He Y, Wei J, Zhang Y, Liu L, Sun Y.

Microb Pathog. 2016 Feb;91:92-8. doi: 10.1016/j.micpath.2015.11.007. Epub 2015 Dec 12.


Ontology-based representation and analysis of host-Brucella interactions.

Lin Y, Xiang Z, He Y.

J Biomed Semantics. 2015 Oct 5;6:37. doi: 10.1186/s13326-015-0036-y. eCollection 2015.


Endoplasmic Reticulum Stress Activates the Inflammasome via NLRP3- and Caspase-2-Driven Mitochondrial Damage.

Bronner DN, Abuaita BH, Chen X, Fitzgerald KA, Nuñez G, He Y, Yin XM, O'Riordan MX.

Immunity. 2015 Sep 15;43(3):451-62. doi: 10.1016/j.immuni.2015.08.008. Epub 2015 Sep 1.


RNA-seq reveals the critical role of OtpR in regulating Brucella melitensis metabolism and virulence under acidic stress.

Liu W, Dong H, Li J, Ou Q, Lv Y, Wang X, Xiang Z, He Y, Wu Q.

Sci Rep. 2015 Aug 5;5:10864. doi: 10.1038/srep10864.


Microbial modulation of host apoptosis and pyroptosis.

He Y, Amer AO.

Front Cell Infect Microbiol. 2014 Jun 19;4:83. doi: 10.3389/fcimb.2014.00083. eCollection 2014. No abstract available.


Ontology-supported research on vaccine efficacy, safety and integrative biological networks.

He Y.

Expert Rev Vaccines. 2014 Jul;13(7):825-41. doi: 10.1586/14760584.2014.923762. Epub 2014 Jun 7. Review.


A genome-wide MeSH-based literature mining system predicts implicit gene-to-gene relationships and networks.

Xiang Z, Qin T, Qin ZS, He Y.

BMC Syst Biol. 2013 Oct 16;7 Suppl 3:S9. doi: 10.1186/1752-0509-7-S3-S9.


Caspase-2 mediates a Brucella abortus RB51-induced hybrid cell death having features of apoptosis and pyroptosis.

Bronner DN, O'Riordan MX, He Y.

Front Cell Infect Microbiol. 2013 Nov 27;3:83. doi: 10.3389/fcimb.2013.00083. eCollection 2013.


Meta-analysis of variables affecting mouse protection efficacy of whole organism Brucella vaccines and vaccine candidates.

Todd TE, Tibi O, Lin Y, Sayers S, Bronner DN, Xiang Z, He Y.

BMC Bioinformatics. 2013;14 Suppl 6:S3. doi: 10.1186/1471-2105-14-S6-S3. Epub 2013 Apr 17.


Systematic annotation and analysis of "virmugens"-virulence factors whose mutants can be used as live attenuated vaccines.

Racz R, Chung M, Xiang Z, He Y.

Vaccine. 2013 Jan 21;31(5):797-805. doi: 10.1016/j.vaccine.2012.11.066. Epub 2012 Dec 6.


Complete genome sequence of Brucella melitensis biovar 3 strain NI, isolated from an aborted bovine fetus.

Liu W, Jing Z, Ou Q, Cui B, He Y, Wu Q.

J Bacteriol. 2012 Nov;194(22):6321. doi: 10.1128/JB.01595-12.


Caspase-2-dependent dendritic cell death, maturation, and priming of T cells in response to Brucella abortus infection.

Li X, He Y.

PLoS One. 2012;7(8):e43512. doi: 10.1371/journal.pone.0043512. Epub 2012 Aug 22.


Systems biology and bioinformatics help decipher Brucella antigens involved in clinical manifestation of the disease.

Banai M, He Y.

Front Cell Infect Microbiol. 2012 Mar 21;2:34. doi: 10.3389/fcimb.2012.00034. eCollection 2012. No abstract available.


Analyses of Brucella pathogenesis, host immunity, and vaccine targets using systems biology and bioinformatics.

He Y.

Front Cell Infect Microbiol. 2012 Feb 1;2:2. doi: 10.3389/fcimb.2012.00002. eCollection 2012. Review.


Vaxjo: a web-based vaccine adjuvant database and its application for analysis of vaccine adjuvants and their uses in vaccine development.

Sayers S, Ulysse G, Xiang Z, He Y.

J Biomed Biotechnol. 2012;2012:831486. doi: 10.1155/2012/831486. Epub 2012 Mar 13.


Brucellosis Ontology (IDOBRU) as an extension of the Infectious Disease Ontology.

Lin Y, Xiang Z, He Y.

J Biomed Semantics. 2011 Oct 31;2(1):9. doi: 10.1186/2041-1480-2-9.

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