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Items: 1 to 20 of 77

1.

Evidence for positive selection on recent human transposable element insertions.

Rishishwar L, Wang L, Wang J, Yi SV, Lachance J, King Jordan I.

Gene. 2018 Jun 25. pii: S0378-1119(18)30738-8. doi: 10.1016/j.gene.2018.06.077. [Epub ahead of print]

PMID:
29953920
2.

Comparative genomics of the miniature wasp and pest control agent Trichogramma pretiosum.

Lindsey ARI, Kelkar YD, Wu X, Sun D, Martinson EO, Yan Z, Rugman-Jones PF, Hughes DST, Murali SC, Qu J, Dugan S, Lee SL, Chao H, Dinh H, Han Y, Doddapaneni HV, Worley KC, Muzny DM, Ye G, Gibbs RA, Richards S, Yi SV, Stouthamer R, Werren JH.

BMC Biol. 2018 May 18;16(1):54. doi: 10.1186/s12915-018-0520-9.

3.

Selection on the regulation of sympathetic nervous activity in humans and chimpanzees.

Lee KS, Chatterjee P, Choi EY, Sung MK, Oh J, Won H, Park SM, Kim YJ, Yi SV, Choi JK.

PLoS Genet. 2018 Apr 19;14(4):e1007311. doi: 10.1371/journal.pgen.1007311. eCollection 2018 Apr.

4.

Development of novel EST-SSR markers for ploidy identification based on de novo transcriptome assembly for Misgurnus anguillicaudatus.

Feng B, Yi SV, Zhang M, Zhou X.

PLoS One. 2018 Apr 12;13(4):e0195829. doi: 10.1371/journal.pone.0195829. eCollection 2018.

5.

Rapid regulatory evolution of a nonrecombining autosome linked to divergent behavioral phenotypes.

Sun D, Huh I, Zinzow-Kramer WM, Maney DL, Yi SV.

Proc Natl Acad Sci U S A. 2018 Mar 13;115(11):2794-2799. doi: 10.1073/pnas.1717721115. Epub 2018 Feb 26.

6.

Insights into Epigenome Evolution from Animal and Plant Methylomes.

Yi SV.

Genome Biol Evol. 2017 Nov 1;9(11):3189-3201. doi: 10.1093/gbe/evx203.

7.

Detecting differential DNA methylation from sequencing of bisulfite converted DNA of diverse species.

Huh I, Wu X, Park T, Yi SV.

Brief Bioinform. 2017 Jul 21. doi: 10.1093/bib/bbx077. [Epub ahead of print]

PMID:
28981571
8.

Body-hypomethylated human genes harbor extensive intragenic transcriptional activity and are prone to cancer-associated dysregulation.

Mendizabal I, Zeng J, Keller TE, Yi SV.

Nucleic Acids Res. 2017 May 5;45(8):4390-4400. doi: 10.1093/nar/gkx020.

9.

Evaluation of Possible Proximate Mechanisms Underlying the Kinship Theory of Intragenomic Conflict in Social Insects.

Galbraith DA, Yi SV, Grozinger CM.

Integr Comp Biol. 2016 Dec;56(6):1206-1214.

PMID:
27940613
10.

What Signatures Dominantly Associate with Gene Age?

Yin H, Wang G, Ma L, Yi SV, Zhang Z.

Genome Biol Evol. 2016 Oct 13;8(10):3083-3089.

11.

Comparative Methylome Analyses Identify Epigenetic Regulatory Loci of Human Brain Evolution.

Mendizabal I, Shi L, Keller TE, Konopka G, Preuss TM, Hsieh TF, Hu E, Zhang Z, Su B, Yi SV.

Mol Biol Evol. 2016 Nov;33(11):2947-2959. Epub 2016 Aug 25.

12.

The multivariate association between genomewide DNA methylation and climate across the range of Arabidopsis thaliana.

Keller TE, Lasky JR, Yi SV.

Mol Ecol. 2016 Apr;25(8):1823-37. doi: 10.1111/mec.13573. Epub 2016 Mar 14.

PMID:
26850505
13.

Evolutionary Transition of Promoter and Gene Body DNA Methylation across Invertebrate-Vertebrate Boundary.

Keller TE, Han P, Yi SV.

Mol Biol Evol. 2016 Apr;33(4):1019-28. doi: 10.1093/molbev/msv345. Epub 2015 Dec 29.

14.

Effects of DNA Methylation and Chromatin State on Rates of Molecular Evolution in Insects.

Glastad KM, Goodisman MA, Yi SV, Hunt BG.

G3 (Bethesda). 2015 Dec 4;6(2):357-63. doi: 10.1534/g3.115.023499.

15.

Whole-genome bisulfite sequencing maps from multiple human tissues reveal novel CpG islands associated with tissue-specific regulation.

Mendizabal I, Yi SV.

Hum Mol Genet. 2016 Jan 1;25(1):69-82. doi: 10.1093/hmg/ddv449. Epub 2015 Oct 28.

16.

Impacts of Chromatin States and Long-Range Genomic Segments on Aging and DNA Methylation.

Sun D, Yi SV.

PLoS One. 2015 Jun 19;10(6):e0128517. doi: 10.1371/journal.pone.0128517. eCollection 2015.

17.

Erratum to: The draft genome of a socially polymorphic halictid bee, Lasioglossum albipes.

Kocher SD, Li C, Yang W, Tan H, Yi SV, Yang X, Hoekstra HE, Zhang G, Pierce NE, Yu DW.

Genome Biol. 2015 Feb 12;16:34. doi: 10.1186/s13059-014-0574-0.

18.
19.

Bis-class: a new classification tool of methylation status using bayes classifier and local methylation information.

Huh I, Yang X, Park T, Yi SV.

BMC Genomics. 2014 Jul 18;15:608. doi: 10.1186/1471-2164-15-608.

20.

Epigenetics and evolution.

Mendizabal I, Keller TE, Zeng J, Yi SV.

Integr Comp Biol. 2014 Jul;54(1):31-42. doi: 10.1093/icb/icu040. Epub 2014 May 16. Review.

PMID:
24838745

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