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Coordinated Hibernation of Transcriptional and Translational Apparatus during Growth Transition of Escherichia coli to Stationary Phase.

Yoshida H, Shimada T, Ishihama A.

mSystems. 2018 Sep 11;3(5). pii: e00057-18. doi: 10.1128/mSystems.00057-18. eCollection 2018 Sep-Oct.


Comprehensive Functional Analysis of the Enterococcus faecalis Core Genome Using an Ordered, Sequence-Defined Collection of Insertional Mutations in Strain OG1RF.

Dale JL, Beckman KB, Willett JLE, Nilson JL, Palani NP, Baller JA, Hauge A, Gohl DM, Erickson R, Manias DA, Sadowsky MJ, Dunny GM.

mSystems. 2018 Sep 11;3(5). pii: e00062-18. doi: 10.1128/mSystems.00062-18. eCollection 2018 Sep-Oct.


Limitations of Correlation-Based Inference in Complex Virus-Microbe Communities.

Coenen AR, Weitz JS.

mSystems. 2018 Aug 28;3(4). pii: e00084-18. doi: 10.1128/mSystems.00084-18. eCollection 2018 Jul-Aug.


Coproporphyrin III Produced by the Bacterium Glutamicibacter arilaitensis Binds Zinc and Is Upregulated by Fungi in Cheese Rinds.

Cleary JL, Kolachina S, Wolfe BE, Sanchez LM.

mSystems. 2018 Aug 21;3(4). pii: e00036-18. doi: 10.1128/mSystems.00036-18. eCollection 2018 Jul-Aug.


Genomic Characterization and Copy Number Variation of Bacillus anthracis Plasmids pXO1 and pXO2 in a Historical Collection of 412 Strains.

Pena-Gonzalez A, Rodriguez-R LM, Marston CK, Gee JE, Gulvik CA, Kolton CB, Saile E, Frace M, Hoffmaster AR, Konstantinidis KT.

mSystems. 2018 Aug 14;3(4). pii: e00065-18. doi: 10.1128/mSystems.00065-18. eCollection 2018 Jul-Aug.


Holistic Assessment of Rumen Microbiome Dynamics through Quantitative Metatranscriptomics Reveals Multifunctional Redundancy during Key Steps of Anaerobic Feed Degradation.

Söllinger A, Tveit AT, Poulsen M, Noel SJ, Bengtsson M, Bernhardt J, Frydendahl Hellwing AL, Lund P, Riedel K, Schleper C, Højberg O, Urich T.

mSystems. 2018 Aug 7;3(4). pii: e00038-18. doi: 10.1128/mSystems.00038-18. eCollection 2018 Jul-Aug.


Combinatorial Approaches to Viral Attenuation.

Paff ML, Jack BR, Smith BL, Bull JJ, Wilke CO.

mSystems. 2018 Jul 31;3(4). pii: e00046-18. doi: 10.1128/mSystems.00046-18. eCollection 2018 Jul-Aug.


Reconstruction of a Global Transcriptional Regulatory Network for Control of Lipid Metabolism in Yeast by Using Chromatin Immunoprecipitation with Lambda Exonuclease Digestion.

Bergenholm D, Liu G, Holland P, Nielsen J.

mSystems. 2018 Jul 31;3(4). pii: e00215-17. doi: 10.1128/mSystems.00215-17. eCollection 2018 Jul-Aug.


Responses of the Human Gut Escherichia coli Population to Pathogen and Antibiotic Disturbances.

Richter TKS, Michalski JM, Zanetti L, Tennant SM, Chen WH, Rasko DA.

mSystems. 2018 Jul 24;3(4). pii: e00047-18. doi: 10.1128/mSystems.00047-18. eCollection 2018 Jul-Aug.


Announcement of 2019 Keystone Symposia Conference: "Microbiome: Chemical Mechanisms and Biological Consequences".

Balskus EP, Turnbaugh PJ, Wolan DW.

mSystems. 2018 Jul 24;3(4). pii: e00115-18. doi: 10.1128/mSystems.00115-18. eCollection 2018 Jul-Aug.


Selection of Appropriate Metagenome Taxonomic Classifiers for Ancient Microbiome Research.

Velsko IM, Frantz LAF, Herbig A, Larson G, Warinner C.

mSystems. 2018 Jul 17;3(4). pii: e00080-18. doi: 10.1128/mSystems.00080-18. eCollection 2018 Jul-Aug.


Balances: a New Perspective for Microbiome Analysis.

Rivera-Pinto J, Egozcue JJ, Pawlowsky-Glahn V, Paredes R, Noguera-Julian M, Calle ML.

mSystems. 2018 Jul 17;3(4). pii: e00053-18. doi: 10.1128/mSystems.00053-18. eCollection 2018 Jul-Aug.


The Current and Future State of Department of Defense (DoD) Microbiome Research: a Summary of the Inaugural DoD Tri-Service Microbiome Consortium Informational Meeting.

Glaven S, Racicot K, Leary DH, Karl JP, Arcidiacono S, Dancy BCR, Chrisey LA, Soares JW.

mSystems. 2018 Jul 10;3(4). pii: e00086-18. doi: 10.1128/mSystems.00086-18. eCollection 2018 Jul-Aug.


Critical Assessment of Metagenome Interpretation Enters the Second Round.

Bremges A, McHardy AC.

mSystems. 2018 Jul 10;3(4). pii: e00103-18. doi: 10.1128/mSystems.00103-18. eCollection 2018 Jul-Aug. No abstract available.


Erratum for Grieneisen and Blekhman, "Crowdsourcing Our National Gut".

Grieneisen LE, Blekhman R.

mSystems. 2018 Jul 10;3(4). pii: e00114-18. doi: 10.1128/mSystems.00114-18. eCollection 2018 Jul-Aug.


Microbial Community Cohesion Mediates Community Turnover in Unperturbed Aquifers.

Danczak RE, Johnston MD, Kenah C, Slattery M, Wilkins MJ.

mSystems. 2018 Jul 3;3(4). pii: e00066-18. doi: 10.1128/mSystems.00066-18. eCollection 2018 Jul-Aug.


Characterization of Wild and Captive Baboon Gut Microbiota and Their Antibiotic Resistomes.

Tsukayama P, Boolchandani M, Patel S, Pehrsson EC, Gibson MK, Chiou KL, Jolly CJ, Rogers J, Phillips-Conroy JE, Dantas G.

mSystems. 2018 Jun 26;3(3). pii: e00016-18. doi: 10.1128/mSystems.00016-18. eCollection 2018 May-Jun.


Identification of Pathogenicity-Associated Loci in Klebsiella pneumoniae from Hospitalized Patients.

Martin RM, Cao J, Wu W, Zhao L, Manthei DM, Pirani A, Snitkin E, Malani PN, Rao K, Bachman MA.

mSystems. 2018 Jun 26;3(3). pii: e00015-18. doi: 10.1128/mSystems.00015-18. eCollection 2018 May-Jun.


Asymptomatic Intestinal Colonization with Protist Blastocystis Is Strongly Associated with Distinct Microbiome Ecological Patterns.

Nieves-Ramírez ME, Partida-Rodríguez O, Laforest-Lapointe I, Reynolds LA, Brown EM, Valdez-Salazar A, Morán-Silva P, Rojas-Velázquez L, Morien E, Parfrey LW, Jin M, Walter J, Torres J, Arrieta MC, Ximénez-García C, Finlay BB.

mSystems. 2018 Jun 26;3(3). pii: e00007-18. doi: 10.1128/mSystems.00007-18. eCollection 2018 May-Jun.


Modeling the Pseudomonas Sulfur Regulome by Quantifying the Storage and Communication of Information.

Larsen PE, Zerbs S, Laible PD, Collart FR, Korajczyk P, Dai Y, Noirot P.

mSystems. 2018 Jun 19;3(3). pii: e00189-17. doi: 10.1128/mSystems.00189-17. eCollection 2018 May-Jun.

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