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Items: 1 to 20 of 176


Overcoming Self-Incompatibility in Diploid Potato Using CRISPR-Cas9.

Enciso-Rodriguez F, Manrique-Carpintero NC, Nadakuduti SS, Buell CR, Zarka D, Douches D.

Front Plant Sci. 2019 Apr 2;10:376. doi: 10.3389/fpls.2019.00376. eCollection 2019.


Quantitative Trait Loci for Freezing Tolerance in a Lowland x Upland Switchgrass Population.

Poudel HP, Sanciangco MD, Kaeppler SM, Buell CR, Casler MD.

Front Plant Sci. 2019 Mar 29;10:372. doi: 10.3389/fpls.2019.00372. eCollection 2019.


Genomic Prediction for Winter Survival of Lowland Switchgrass in the Northern USA.

Poudel HP, Sanciangco MD, Kaeppler SM, Buell CR, Casler MD.

G3 (Bethesda). 2019 Apr 10. pii: g3.400094.2019. doi: 10.1534/g3.119.400094. [Epub ahead of print]


Evaluation of Methods to Assess in vivo Activity of Engineered Genome-Editing Nucleases in Protoplasts.

Nadakuduti SS, Starker CG, Ko DK, Jayakody TB, Buell CR, Voytas DF, Douches DS.

Front Plant Sci. 2019 Feb 8;10:110. doi: 10.3389/fpls.2019.00110. eCollection 2019.


Haplotype-phased genome and evolution of phytonutrient pathways of tetraploid blueberry.

Colle M, Leisner CP, Wai CM, Ou S, Bird KA, Wang J, Wisecaver JH, Yocca AE, Alger EI, Tang H, Xiong Z, Callow P, Ben-Zvi G, Brodt A, Baruch K, Swale T, Shiue L, Song GQ, Childs KL, Schilmiller A, Vorsa N, Buell CR, VanBuren R, Jiang N, Edger PP.

Gigascience. 2019 Mar 1;8(3). pii: giz012. doi: 10.1093/gigascience/giz012.


A chromosomal-scale genome assembly of Tectona grandis reveals the importance of tandem gene duplication and enables discovery of genes in natural product biosynthetic pathways.

Zhao D, Hamilton JP, Bhat WW, Johnson SR, Godden GT, Kinser TJ, Boachon B, Dudareva N, Soltis DE, Soltis PS, Hamberger B, Buell CR.

Gigascience. 2019 Mar 1;8(3). pii: giz005. doi: 10.1093/gigascience/giz005.


Genome Editing in Potato with CRISPR/Cas9.

Nadakuduti SS, Starker CG, Voytas DF, Buell CR, Douches DS.

Methods Mol Biol. 2019;1917:183-201. doi: 10.1007/978-1-4939-8991-1_14.


An updated gene atlas for maize reveals organ-specific and stress-induced genes.

Hoopes GM, Hamilton JP, Wood JC, Esteban E, Pasha A, Vaillancourt B, Provart NJ, Buell CR.

Plant J. 2019 Mar;97(6):1154-1167. doi: 10.1111/tpj.14184. Epub 2019 Jan 22.


Candidate Variants for Additive and Interactive Effects on Bioenergy Traits in Switchgrass (Panicum virgatum L.) Identified by Genome-Wide Association Analyses.

Ramstein GP, Evans J, Nandety A, Saha MC, Brummer EC, Kaeppler SM, Buell CR, Casler MD.

Plant Genome. 2018 Nov;11(3). doi: 10.3835/plantgenome2018.01.0002.


A database-driven approach identifies additional diterpene synthase activities in the mint family (Lamiaceae).

Johnson SR, Bhat WW, Bibik J, Turmo A, Hamberger B; Evolutionary Mint Genomics Consortium, Hamberger B.

J Biol Chem. 2019 Jan 25;294(4):1349-1362. doi: 10.1074/jbc.RA118.006025. Epub 2018 Nov 29.


Genome Editing for Crop Improvement - Applications in Clonally Propagated Polyploids With a Focus on Potato (Solanum tuberosum L.).

Nadakuduti SS, Buell CR, Voytas DF, Starker CG, Douches DS.

Front Plant Sci. 2018 Nov 13;9:1607. doi: 10.3389/fpls.2018.01607. eCollection 2018.


A common genetic mechanism underlies morphological diversity in fruits and other plant organs.

Wu S, Zhang B, Keyhaninejad N, Rodríguez GR, Kim HJ, Chakrabarti M, Illa-Berenguer E, Taitano NK, Gonzalo MJ, Díaz A, Pan Y, Leisner CP, Halterman D, Buell CR, Weng Y, Jansky SH, van Eck H, Willemsen J, Monforte AJ, Meulia T, van der Knaap E.

Nat Commun. 2018 Nov 9;9(1):4734. doi: 10.1038/s41467-018-07216-8.


Transcriptome profiling of transgenic potato plants provides insights into variability caused by plant transformation.

Ko DK, Nadakuduti SS, Douches DS, Buell CR.

PLoS One. 2018 Nov 8;13(11):e0206055. doi: 10.1371/journal.pone.0206055. eCollection 2018.


Genome sequences of two diploid wild relatives of cultivated sweetpotato reveal targets for genetic improvement.

Wu S, Lau KH, Cao Q, Hamilton JP, Sun H, Zhou C, Eserman L, Gemenet DC, Olukolu BA, Wang H, Crisovan E, Godden GT, Jiao C, Wang X, Kitavi M, Manrique-Carpintero N, Vaillancourt B, Wiegert-Rininger K, Yang X, Bao K, Schaff J, Kreuze J, Gruneberg W, Khan A, Ghislain M, Ma D, Jiang J, Mwanga ROM, Leebens-Mack J, Coin LJM, Yencho GC, Buell CR, Fei Z.

Nat Commun. 2018 Nov 2;9(1):4580. doi: 10.1038/s41467-018-06983-8.


Gene Discovery in Gelsemium Highlights Conserved Gene Clusters in Monoterpene Indole Alkaloid Biosynthesis.

Franke J, Kim J, Hamilton JP, Zhao D, Pham GM, Wiegert-Rininger K, Crisovan E, Newton L, Vaillancourt B, Tatsis E, Buell CR, O'Connor SE.

Chembiochem. 2019 Jan 2;20(1):83-87. doi: 10.1002/cbic.201800592. Epub 2018 Nov 13.


Genome-Wide Association Study in Pseudo-F2 Populations of Switchgrass Identifies Genetic Loci Affecting Heading and Anthesis Dates.

Taylor M, Tornqvist CE, Zhao X, Grabowski P, Doerge R, Ma J, Volenec J, Evans J, Ramstein GP, Sanciangco MD, Buell CR, Casler MD, Jiang Y.

Front Plant Sci. 2018 Sep 13;9:1250. doi: 10.3389/fpls.2018.01250. eCollection 2018.


Quantitative Trait Locus Mapping for Flowering Time in a Lowland × Upland Switchgrass Pseudo-F2 Population.

Tornqvist CE, Taylor M, Jiang Y, Evans J, Buell CR, Kaeppler SM, Casler MD.

Plant Genome. 2018 Jul;11(2). doi: 10.3835/plantgenome2017.10.0093.


Genome Reduction in Tetraploid Potato Reveals Genetic Load, Haplotype Variation, and Loci Associated With Agronomic Traits.

Manrique-Carpintero NC, Coombs JJ, Pham GM, Laimbeer FPE, Braz GT, Jiang J, Veilleux RE, Buell CR, Douches DS.

Front Plant Sci. 2018 Jul 3;9:944. doi: 10.3389/fpls.2018.00944. eCollection 2018.


Reply to Huang et al.: Avoiding "one-size-fits-all" approaches to variant discovery.

Hardigan MA, Laimbeer FPE, Hamilton JP, Vaillancourt B, Douches DS, Farré EM, Veilleux RE, Buell CR.

Proc Natl Acad Sci U S A. 2018 Jul 10;115(28):E6394-E6395. doi: 10.1073/pnas.1807622115. Epub 2018 Jun 22. No abstract available.


Phylogenomic Mining of the Mints Reveals Multiple Mechanisms Contributing to the Evolution of Chemical Diversity in Lamiaceae.

Mint Evolutionary Genomics Consortium. Electronic address:; Mint Evolutionary Genomics Consortium.

Mol Plant. 2018 Aug 6;11(8):1084-1096. doi: 10.1016/j.molp.2018.06.002. Epub 2018 Jun 18.

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