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Items: 1 to 20 of 145

1.

Novel Loci Underlie Natural Variation in Vitamin E Levels in Maize Grain.

Diepenbrock CH, Kandianis CB, Lipka AE, Magallanes-Lundback M, Vaillancourt B, Góngora-Castillo E, Wallace JG, Cepela J, Mesberg A, Bradbury P, Ilut DC, Mateos-Hernandez M, Hamilton J, Owens BF, Tiede T, Buckler ES, Rocheford T, Buell CR, Gore MA, DellaPenna D.

Plant Cell. 2017 Oct 2. pii: tpc.00475.2017. doi: 10.1105/tpc.17.00475. [Epub ahead of print]

2.

De novo genome assembly of Camptotheca acuminata, a natural source of the anti-cancer compound camptothecin.

Zhao D, Hamilton JP, Pham GM, Crisovan E, Wiegert-Rininger K, Vaillancourt B, DellaPenna D, Buell CR.

Gigascience. 2017 Sep 1;6(9):1-7. doi: 10.1093/gigascience/gix065.

PMID:
28922823
3.

Extensive genome heterogeneity leads to preferential allele expression and copy number-dependent expression in cultivated potato.

Pham GM, Newton L, Wiegert-Rininger K, Vaillancourt B, Douches DS, Buell CR.

Plant J. 2017 Sep 4. doi: 10.1111/tpj.13706. [Epub ahead of print]

PMID:
28869794
4.

Differential iridoid production as revealed by a diversity panel of 84 cultivated and wild blueberry species.

Leisner CP, Kamileen MO, Conway ME, O'Connor SE, Buell CR.

PLoS One. 2017 Jun 13;12(6):e0179417. doi: 10.1371/journal.pone.0179417. eCollection 2017.

5.

Technology Turbocharges Functional Genomics.

Buell CR, Voytas D.

Plant Cell. 2017 Jun;29(6):1179-1180. doi: 10.1105/tpc.17.00443. Epub 2017 Jun 5. No abstract available.

6.

Elevating the conversation about GE crops.

Gould F, Amasino RM, Brossard D, Buell CR, Dixon RA, Falck-Zepeda JB, Gallo MA, Giller KE, Glenna LL, Griffin T, Hamaker BR, Kareiva PM, Magraw D, Mallory-Smith C, Pixley KV, Ransom EP, Rodemeyer M, Stelly DM, Stewart CN Jr, Whitaker RJ.

Nat Biotechnol. 2017 Apr 11;35(4):302-304. doi: 10.1038/nbt.3841. No abstract available.

PMID:
28398318
7.

Self-Fertility in a Cultivated Diploid Potato Population Examined with the Infinium 8303 Potato Single-Nucleotide Polymorphism Array.

Peterson BA, Holt SH, Laimbeer FP, Doulis AG, Coombs J, Douches DS, Hardigan MA, Buell CR, Veilleux RE.

Plant Genome. 2016 Nov;9(3). doi: 10.3835/plantgenome2016.01.0003.

8.

An Expanded Maize Gene Expression Atlas based on RNA Sequencing and its Use to Explore Root Development.

Stelpflug SC, Sekhon RS, Vaillancourt B, Hirsch CN, Buell CR, de Leon N, Kaeppler SM.

Plant Genome. 2016 Mar;9(1). doi: 10.3835/plantgenome2015.04.0025.

9.

Analysis of Ribosome-Associated mRNAs in Rice Reveals the Importance of Transcript Size and GC Content in Translation.

Zhao D, Hamilton JP, Hardigan M, Yin D, He T, Vaillancourt B, Reynoso M, Pauluzzi G, Funkhouser S, Cui Y, Bailey-Serres J, Jiang J, Buell CR, Jiang N.

G3 (Bethesda). 2017 Jan 5;7(1):203-219. doi: 10.1534/g3.116.036020.

10.

Draft Assembly of Elite Inbred Line PH207 Provides Insights into Genomic and Transcriptome Diversity in Maize.

Hirsch CN, Hirsch CD, Brohammer AB, Bowman MJ, Soifer I, Barad O, Shem-Tov D, Baruch K, Lu F, Hernandez AG, Fields CJ, Wright CL, Koehler K, Springer NM, Buckler E, Buell CR, de Leon N, Kaeppler SM, Childs KL, Mikel MA.

Plant Cell. 2016 Nov;28(11):2700-2714. Epub 2016 Nov 1.

11.

Integrating metabolomics and transcriptomics data to discover a biocatalyst that can generate the amine precursors for alkamide biosynthesis.

Rizhsky L, Jin H, Shepard MR, Scott HW, Teitgen AM, Perera MA, Mhaske V, Jose A, Zheng X, Crispin M, Wurtele ES, Jones D, Hur M, Góngora-Castillo E, Buell CR, Minto RE, Nikolau BJ.

Plant J. 2016 Dec;88(5):775-793. doi: 10.1111/tpj.13295. Epub 2016 Sep 27.

PMID:
27497272
12.

Genome-wide associations with flowering time in switchgrass using exome-capture sequencing data.

Grabowski PP, Evans J, Daum C, Deshpande S, Barry KW, Kennedy M, Ramstein G, Kaeppler SM, Buell CR, Jiang Y, Casler MD.

New Phytol. 2017 Jan;213(1):154-169. doi: 10.1111/nph.14101. Epub 2016 Jul 22.

PMID:
27443672
13.

Comparative Analysis of Regions with Distorted Segregation in Three Diploid Populations of Potato.

Manrique-Carpintero NC, Coombs JJ, Veilleux RE, Buell CR, Douches DS.

G3 (Bethesda). 2016 Aug 9;6(8):2617-28. doi: 10.1534/g3.116.030031.

14.

Susceptibility of Maize to Stalk Rot Caused by Fusarium graminearum Deoxynivalenol and Zearalenone Mutants.

Quesada-Ocampo LM, Al-Haddad J, Scruggs AC, Buell CR, Trail F.

Phytopathology. 2016 Aug;106(8):920-7. doi: 10.1094/PHYTO-09-15-0199-R. Epub 2016 May 17.

15.

Accuracy of Genomic Prediction in Switchgrass (Panicum virgatum L.) Improved by Accounting for Linkage Disequilibrium.

Ramstein GP, Evans J, Kaeppler SM, Mitchell RB, Vogel KP, Buell CR, Casler MD.

G3 (Bethesda). 2016 Apr 7;6(4):1049-62. doi: 10.1534/g3.115.024950.

16.

Haplotype-Phased Synthetic Long Reads from Short-Read Sequencing.

Stapleton JA, Kim J, Hamilton JP, Wu M, Irber LC, Maddamsetti R, Briney B, Newton L, Burton DR, Brown CT, Chan C, Buell CR, Whitehead TA.

PLoS One. 2016 Jan 20;11(1):e0147229. doi: 10.1371/journal.pone.0147229. eCollection 2016.

17.

Genome Reduction Uncovers a Large Dispensable Genome and Adaptive Role for Copy Number Variation in Asexually Propagated Solanum tuberosum.

Hardigan MA, Crisovan E, Hamilton JP, Kim J, Laimbeer P, Leisner CP, Manrique-Carpintero NC, Newton L, Pham GM, Vaillancourt B, Yang X, Zeng Z, Douches DS, Jiang J, Veilleux RE, Buell CR.

Plant Cell. 2016 Feb;28(2):388-405. doi: 10.1105/tpc.15.00538. Epub 2016 Jan 15.

18.

Diversity and population structure of northern switchgrass as revealed through exome capture sequencing.

Evans J, Crisovan E, Barry K, Daum C, Jenkins J, Kunde-Ramamoorthy G, Nandety A, Ngan CY, Vaillancourt B, Wei CL, Schmutz J, Kaeppler SM, Casler MD, Buell CR.

Plant J. 2015 Nov;84(4):800-15. doi: 10.1111/tpj.13041.

19.

A Revolution in Plant Metabolism: Genome-Enabled Pathway Discovery.

Kim J, Buell CR.

Plant Physiol. 2015 Nov;169(3):1532-9. doi: 10.1104/pp.15.00976. Epub 2015 Jul 29.

20.

Shared Genomic Regions Between Derivatives of a Large Segregating Population of Maize Identified Using Bulked Segregant Analysis Sequencing and Traditional Linkage Analysis.

Haase NJ, Beissinger T, Hirsch CN, Vaillancourt B, Deshpande S, Barry K, Buell CR, Kaeppler SM, de Leon N.

G3 (Bethesda). 2015 Jun 1;5(8):1593-602. doi: 10.1534/g3.115.017665.

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