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Items: 18

1.
2.

Integration of proteomic and transcriptomic profiles reveals multiple levels of genetic regulation of salt tolerance in cotton.

Peng Z, He S, Gong W, Xu F, Pan Z, Jia Y, Geng X, Du X.

BMC Plant Biol. 2018 Jun 20;18(1):128. doi: 10.1186/s12870-018-1350-1.

3.

Dissection of complicate genetic architecture and breeding perspective of cottonseed traits by genome-wide association study.

Du X, Liu S, Sun J, Zhang G, Jia Y, Pan Z, Xiang H, He S, Xia Q, Xiao S, Shi W, Quan Z, Liu J, Ma J, Pang B, Wang L, Sun G, Gong W, Jenkins JN, Lou X, Zhu J, Xu H.

BMC Genomics. 2018 Jun 13;19(1):451. doi: 10.1186/s12864-018-4837-0.

4.

Resequencing a core collection of upland cotton identifies genomic variation and loci influencing fiber quality and yield.

Ma Z, He S, Wang X, Sun J, Zhang Y, Zhang G, Wu L, Li Z, Liu Z, Sun G, Yan Y, Jia Y, Yang J, Pan Z, Gu Q, Li X, Sun Z, Dai P, Liu Z, Gong W, Wu J, Wang M, Liu H, Feng K, Ke H, Wang J, Lan H, Wang G, Peng J, Wang N, Wang L, Pang B, Peng Z, Li R, Tian S, Du X.

Nat Genet. 2018 Jun;50(6):803-813. doi: 10.1038/s41588-018-0119-7. Epub 2018 May 7.

PMID:
29736016
5.

Resequencing of 243 diploid cotton accessions based on an updated A genome identifies the genetic basis of key agronomic traits.

Du X, Huang G, He S, Yang Z, Sun G, Ma X, Li N, Zhang X, Sun J, Liu M, Jia Y, Pan Z, Gong W, Liu Z, Zhu H, Ma L, Liu F, Yang D, Wang F, Fan W, Gong Q, Peng Z, Wang L, Wang X, Xu S, Shang H, Lu C, Zheng H, Huang S, Lin T, Zhu Y, Li F.

Nat Genet. 2018 Jun;50(6):796-802. doi: 10.1038/s41588-018-0116-x. Epub 2018 May 7.

PMID:
29736014
6.

QTL Mapping of Fiber Quality and Yield-Related Traits in an Intra-Specific Upland Cotton Using Genotype by Sequencing (GBS).

Diouf L, Magwanga RO, Gong W, He S, Pan Z, Jia YH, Kirungu JN, Du X.

Int J Mol Sci. 2018 Feb 1;19(2). pii: E441. doi: 10.3390/ijms19020441.

7.

Genetic dissection of the fuzzless seed trait in Gossypium barbadense.

Zhu QH, Yuan Y, Stiller W, Jia Y, Wang P, Pan Z, Du X, Llewellyn D, Wilson I.

J Exp Bot. 2018 Feb 23;69(5):997-1009. doi: 10.1093/jxb/erx459.

8.

iTRAQ-Based Comparative Proteomic Analysis of Seedling Leaves of Two Upland Cotton Genotypes Differing in Salt Tolerance.

Gong W, Xu F, Sun J, Peng Z, He S, Pan Z, Du X.

Front Plant Sci. 2017 Dec 13;8:2113. doi: 10.3389/fpls.2017.02113. eCollection 2017.

9.

High-Density Linkage Map Construction and Mapping of Salt-Tolerant QTLs at Seedling Stage in Upland Cotton Using Genotyping by Sequencing (GBS).

Diouf L, Pan Z, He SP, Gong WF, Jia YH, Magwanga RO, Romy KRE, Or Rashid H, Kirungu JN, Du X.

Int J Mol Sci. 2017 Dec 5;18(12). pii: E2622. doi: 10.3390/ijms18122622.

10.

Association mapping analysis of fiber yield and quality traits in Upland cotton (Gossypium hirsutum L.).

Ademe MS, He S, Pan Z, Sun J, Wang Q, Qin H, Liu J, Liu H, Yang J, Xu D, Yang J, Ma Z, Zhang J, Li Z, Cai Z, Zhang X, Zhang X, Huang A, Yi X, Zhou G, Li L, Zhu H, Pang B, Wang L, Jia Y, Du X.

Mol Genet Genomics. 2017 Dec;292(6):1267-1280. doi: 10.1007/s00438-017-1346-9. Epub 2017 Jul 26.

PMID:
28748394
11.

Genomic analyses in cotton identify signatures of selection and loci associated with fiber quality and yield traits.

Fang L, Wang Q, Hu Y, Jia Y, Chen J, Liu B, Zhang Z, Guan X, Chen S, Zhou B, Mei G, Sun J, Pan Z, He S, Xiao S, Shi W, Gong W, Liu J, Ma J, Cai C, Zhu X, Guo W, Du X, Zhang T.

Nat Genet. 2017 Jul;49(7):1089-1098. doi: 10.1038/ng.3887. Epub 2017 Jun 5.

PMID:
28581501
12.

Na+ compartmentalization related to salinity stress tolerance in upland cotton (Gossypium hirsutum) seedlings.

Peng Z, He S, Sun J, Pan Z, Gong W, Lu Y, Du X.

Sci Rep. 2016 Oct 4;6:34548. doi: 10.1038/srep34548.

13.

MicroRNA and mRNA expression profiling analysis revealed the regulation of plant height in Gossypium hirsutum.

An W, Gong W, He S, Pan Z, Sun J, Du X.

BMC Genomics. 2015 Oct 30;16:886. doi: 10.1186/s12864-015-2071-6.

14.

The Negative Correlation between Fiber Color and Quality Traits Revealed by QTL Analysis.

Feng H, Guo L, Wang G, Sun J, Pan Z, He S, Zhu H, Sun J, Du X.

PLoS One. 2015 Jun 29;10(6):e0129490. doi: 10.1371/journal.pone.0129490. eCollection 2015.

15.

[Homologous simple sequence repeats (SSRs) analysis in tetraploid (AD1) and diploid (A₂, D₅) genomes of Gossypium].

Gaofei S, Shoupu H, Zhaoe P, Xiongming D.

Yi Chuan. 2015 Feb;37(2):192-203. doi: 10.16288/j.yczz.14-274. Chinese.

PMID:
25665646
16.

Comparison of the transcriptome between two cotton lines of different fiber color and quality.

Gong W, He S, Tian J, Sun J, Pan Z, Jia Y, Sun G, Du X.

PLoS One. 2014 Nov 17;9(11):e112966. doi: 10.1371/journal.pone.0112966. eCollection 2014.

17.

Comprehensive analysis of differentially expressed genes and transcriptional regulation induced by salt stress in two contrasting cotton genotypes.

Peng Z, He S, Gong W, Sun J, Pan Z, Xu F, Lu Y, Du X.

BMC Genomics. 2014 Sep 5;15:760. doi: 10.1186/1471-2164-15-760.

18.

Association mapping for epistasis and environmental interaction of yield traits in 323 cotton cultivars under 9 different environments.

Jia Y, Sun X, Sun J, Pan Z, Wang X, He S, Xiao S, Shi W, Zhou Z, Pang B, Wang L, Liu J, Ma J, Du X, Zhu J.

PLoS One. 2014 May 8;9(5):e95882. doi: 10.1371/journal.pone.0095882. eCollection 2014.

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