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Items: 10

1.

Atomistic Analysis of ToxN and ToxI Complex Unbinding Mechanism.

Hu G, Yu X, Bian Y, Cao Z, Xu S, Zhao L, Ji B, Wang W, Wang J.

Int J Mol Sci. 2018 Nov 9;19(11). pii: E3524. doi: 10.3390/ijms19113524.

2.

Self-derived structure-disrupting peptides targeting methionine aminopeptidase in pathogenic bacteria: a new strategy to generate antimicrobial peptides.

Zhan J, Jia H, Semchenko EA, Bian Y, Zhou AM, Li Z, Yang Y, Wang J, Sarkar S, Totsika M, Blanchard H, Jen FE, Ye Q, Haselhorst T, Jennings MP, Seib KL, Zhou Y.

FASEB J. 2019 Feb;33(2):2095-2104. doi: 10.1096/fj.201700613RR. Epub 2018 Sep 27.

PMID:
30260702
3.

Exploration of the folding dynamics of human telomeric G-quadruplex with a hybrid atomistic structure-based model.

Bian Y, Ren W, Song F, Yu J, Wang J.

J Chem Phys. 2018 May 28;148(20):204107. doi: 10.1063/1.5028498.

PMID:
29865833
4.

Molecular Dynamics Simulations of Human Antimicrobial Peptide LL-37 in Model POPC and POPG Lipid Bilayers.

Zhao L, Cao Z, Bian Y, Hu G, Wang J, Zhou Y.

Int J Mol Sci. 2018 Apr 13;19(4). pii: E1186. doi: 10.3390/ijms19041186.

5.

Fast-Folding Pathways of the Thrombin-Binding Aptamer G-Quadruplex Revealed by a Markov State Model.

Bian Y, Song F, Cao Z, Zhao L, Yu J, Guo X, Wang J.

Biophys J. 2018 Apr 10;114(7):1529-1538. doi: 10.1016/j.bpj.2018.02.021.

6.

Bias-Exchange Metadynamics Simulation of Membrane Permeation of 20 Amino Acids.

Cao Z, Bian Y, Hu G, Zhao L, Kong Z, Yang Y, Wang J, Zhou Y.

Int J Mol Sci. 2018 Mar 16;19(3). pii: E885. doi: 10.3390/ijms19030885.

7.

Unexpected Position-Dependent Effects of Ribose G-Quartets in G-Quadruplexes.

Zhou J, Amrane S, Rosu F, Salgado GF, Bian Y, Tateishi-Karimata H, Largy E, Korkut DN, Bourdoncle A, Miyoshi D, Zhang J, Ju H, Wang W, Sugimoto N, Gabelica V, Mergny JL.

J Am Chem Soc. 2017 Jun 14;139(23):7768-7779. doi: 10.1021/jacs.7b00648. Epub 2017 Jun 5.

PMID:
28523907
8.

Free energy landscape and multiple folding pathways of an H-type RNA pseudoknot.

Bian Y, Zhang J, Wang J, Wang J, Wang W.

PLoS One. 2015 Jun 1;10(6):e0129089. doi: 10.1371/journal.pone.0129089. eCollection 2015.

9.

Atomistic picture for the folding pathway of a hybrid-1 type human telomeric DNA G-quadruplex.

Bian Y, Tan C, Wang J, Sheng Y, Zhang J, Wang W.

PLoS Comput Biol. 2014 Apr 10;10(4):e1003562. doi: 10.1371/journal.pcbi.1003562. eCollection 2014 Apr.

10.

RNA fragment modeling with a nucleobase discrete-state model.

Zhang J, Bian Y, Lin H, Wang W.

Phys Rev E Stat Nonlin Soft Matter Phys. 2012 Feb;85(2 Pt 1):021909. Epub 2012 Feb 14.

PMID:
22463246

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